Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 MTCYBP12-201ENST00000440559 1134 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 LDHBP2-201ENST00000456969 1005 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AC106822.1-201ENST00000502647 526 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 SCARNA5-201ENST00000516201 276 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 SNORA74.1-201ENST00000516320 180 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AC011853.1-201ENST00000518911 454 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 AC005363.1-201ENST00000530779 351 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AC134669.1-201ENST00000581275 672 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AC079880.2-201ENST00000603790 1213 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 MIR8084-201ENST00000614105 89 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 CASC19-274ENST00000642018 970 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 UGT2B26P-201ENST00000508672 1613 ntBASIC6.02□□□□□ -1.45
LRFN1Q9P244 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
LRFN1Q9P244 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
LRFN1Q9P244 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 RNA5SP77-201ENST00000365394 120 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 RNU4-74P-201ENST00000411280 161 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC096537.2-201ENST00000413707 714 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 AL606495.1-201ENST00000422100 813 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 AL512661.1-201ENST00000434586 1253 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 RN7SL834P-201ENST00000461450 286 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 H3F3AP5-201ENST00000475267 429 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC131392.1-201ENST00000506490 633 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 HMGN1P16-201ENST00000508308 283 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 HAUS1P3-201ENST00000523909 662 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC139697.1-201ENST00000548429 745 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC023968.1-201ENST00000560719 475 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC006116.7-201ENST00000590141 756 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 AL589863.1-201ENST00000595383 631 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 AL356986.1-201ENST00000604085 341 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 BNIP3P31-201ENST00000604515 566 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 RPL12P48-201ENST00000605620 304 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC018645.2-201ENST00000609151 472 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
LRFN1Q9P244 MIR6085-201ENST00000618314 110 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 AP001885.1-201ENST00000621658 558 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC015660.5-201ENST00000623238 564 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC018692.2-201ENST00000624130 348 ntBASIC6.01□□□□□ -1.45
LRFN1Q9P244 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
LRFN1Q9P244 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms