Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 EEF1A1P30-201ENST00000429708 1315 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AL360270.2-201ENST00000562952 5985 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AC010894.1-201ENST00000313760 361 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RNA5SP308-201ENST00000362532 115 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RNA5SP375-201ENST00000362975 119 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RNU1-49P-201ENST00000363468 159 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RN7SKP69-201ENST00000365390 305 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RN7SKP117-201ENST00000410175 264 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RN7SKP121-201ENST00000410842 305 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 MYL6P5-201ENST00000412707 459 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AC245096.1-201ENST00000413104 546 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 CDY17P-201ENST00000414121 1282 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AL161742.1-201ENST00000418154 584 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RPS7P14-201ENST00000426405 583 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 CDY8P-201ENST00000428380 1279 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 NPM1P18-201ENST00000434232 732 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AL645939.3-201ENST00000435408 225 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 EMC3-AS1-205ENST00000438698 534 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 CDY20P-201ENST00000447528 1279 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RARRES2P3-201ENST00000457739 473 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RPS10P28-201ENST00000480396 498 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RN7SL413P-201ENST00000482700 297 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AL079303.1-201ENST00000486611 463 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 OR7E157P-201ENST00000494376 911 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 OR7E99P-201ENST00000505750 922 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 Y_RNA.710-201ENST00000516975 110 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AC023080.1-201ENST00000551663 931 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AC090826.1-203ENST00000569235 490 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RPL7AP69-201ENST00000595306 806 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AC141002.1-201ENST00000607025 279 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AL589743.6-201ENST00000611025 117 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RN7SL261P-201ENST00000613441 282 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 MIR6732-201ENST00000619365 60 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AC103564.3-201ENST00000621194 220 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AC018558.4-201ENST00000622153 281 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AC025262.3-201ENST00000623666 360 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 MBD5-221ENST00000637159 902 ntTSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 ABCC13-202ENST00000463099 3842 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 AC009220.2-201ENST00000489759 1751 ntBASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC3.97□□□□□ -1.77
SND1-IT1Q9HBX3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC3.96□□□□□ -1.77
SND1-IT1Q9HBX3 AC233968.1-201ENST00000611212 1300 ntBASIC3.96□□□□□ -1.77
SND1-IT1Q9HBX3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SND1-IT1Q9HBX3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SND1-IT1Q9HBX3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 AC004023.1-201ENST00000561473 1744 ntBASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SND1-IT1Q9HBX3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms