Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
VIPAS39Q9H9C1 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 OR9K1P-201ENST00000326513 941 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 MTND2P12-201ENST00000417560 1252 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 DPPA2P2-201ENST00000418220 897 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC009362.1-201ENST00000427253 406 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 RPL3P11-201ENST00000434028 1146 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 OR3D1P-201ENST00000438288 955 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC015983.1-201ENST00000441577 373 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 CYCSP51-201ENST00000443545 318 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 VN1R96P-201ENST00000446052 858 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 PCMTD1P3-201ENST00000451824 472 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AL133351.3-201ENST00000454998 193 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 RPS7P6-201ENST00000485777 579 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC083795.1-201ENST00000491760 320 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC105384.2-201ENST00000508433 640 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 TMEM97P2-201ENST00000517841 403 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC079064.1-201ENST00000528365 362 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC040958.1-201ENST00000561102 201 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 MRPS21P8-201ENST00000569196 235 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 MIR4258-201ENST00000580920 91 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC103703.1-201ENST00000634783 663 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC138627.1-204ENST00000641894 765 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC015689.2-201ENST00000528172 1738 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 AC006484.1-201ENST00000435086 1884 ntBASIC5.96□□□□□ -1.46
VIPAS39Q9H9C1 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 OR4F13P-202ENST00000560066 2054 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AC005261.6-201ENST00000623072 1387 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 RNA5SP241-201ENST00000391326 114 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 REREP1Y-201ENST00000422655 198 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 E2F6P1-201ENST00000428850 745 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 REREP2Y-201ENST00000439103 200 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 E2F6P3-201ENST00000441743 743 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 POU5F1P5-201ENST00000445059 658 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AC012512.1-201ENST00000446594 718 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 MEMO1P4-201ENST00000453590 386 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 PSAT1P4-201ENST00000466500 526 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AC016559.2-201ENST00000510759 359 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 MAST4-IT1-201ENST00000514241 658 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AC021733.2-201ENST00000518830 497 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AC020937.1-201ENST00000519677 1013 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AC091932.1-201ENST00000569381 427 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 MIR6737-201ENST00000617385 70 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.95□□□□□ -1.46
VIPAS39Q9H9C1 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms