Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 TMA16P2-201ENST00000413187 601 ntBASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 AC015864.1-201ENST00000496512 544 ntBASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 AC139697.1-201ENST00000548429 745 ntBASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 MIR4646-201ENST00000580775 63 ntBASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK3Q9BYB0 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 SNORA16A-201ENST00000384342 137 ntBASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 TPT1P13-201ENST00000449760 499 ntBASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 LDHBP2-201ENST00000456969 1005 ntBASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 RN7SL738P-201ENST00000470264 297 ntBASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 MRPS21P7-201ENST00000566937 238 ntBASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 AC008115.3-201ENST00000614874 549 ntBASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 MIR6837-201ENST00000620884 64 ntBASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 AC130448.2-201ENST00000624082 374 ntBASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 AC005224.3-201ENST00000584683 2140 ntBASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK3Q9BYB0 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 RPL23P2-201ENST00000320371 421 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AC011742.2-201ENST00000443818 352 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AC083982.1-201ENST00000485679 344 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 IGLV3-24-201ENST00000517477 197 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AC015720.2-201ENST00000567709 334 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 FAM25E-202ENST00000608562 189 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AC132068.1-201ENST00000623805 459 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 MIR7641-1-201ENST00000627518 61 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AC006213.6-201ENST00000623722 4179 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AC079841.1-201ENST00000481228 950 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 EIF1P7-201ENST00000487533 337 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 MIR4480-201ENST00000582492 71 ntBASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK3Q9BYB0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK3Q9BYB0 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms