Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 OR7E101P-201ENST00000400428 513 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AL121977.1-201ENST00000401636 979 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 SDHDP6-201ENST00000414693 480 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AC093155.2-201ENST00000420734 937 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 RPS4XP14-201ENST00000493072 781 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 TMEM97P2-201ENST00000517841 403 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AL355834.1-201ENST00000556602 3965 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AL049779.3-201ENST00000557141 606 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 MIR3176-201ENST00000582210 90 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 AC078880.4-201ENST00000617627 1749 ntBASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 BMS1P13-201ENST00000417301 885 ntBASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 BMS1P10-201ENST00000443754 1120 ntBASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 OR56A7P-201ENST00000524865 941 ntBASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 MIR4776-2-201ENST00000580204 80 ntBASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 RPL12P48-201ENST00000605620 304 ntBASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RPAP1Q9BWH6 AC106872.5-201ENST00000508856 1416 ntBASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 RPS14P4-201ENST00000415880 418 ntBASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 KIF4CP-201ENST00000422742 1279 ntBASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 MRPS21P3-201ENST00000436696 262 ntBASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 DNAJC19P5-201ENST00000443295 316 ntBASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 AL162739.1-201ENST00000450606 307 ntBASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 RPSAP39-201ENST00000467439 883 ntBASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 RPL23AP40-201ENST00000487630 390 ntBASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 AC051619.2-201ENST00000559063 397 ntBASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 RBPJP7-201ENST00000442803 1447 ntBASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 RBPJP5-201ENST00000449433 1447 ntBASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RPAP1Q9BWH6 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
RPAP1Q9BWH6 AC245060.4-201ENST00000413293 1121 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms