Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SIN3AQ96ST3 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
SIN3AQ96ST3 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC8.42□□□□□ -1.06
SIN3AQ96ST3 AC022826.1-201ENST00000519383 805 ntBASIC8.42□□□□□ -1.06
SIN3AQ96ST3 HSPE1P2-201ENST00000554777 306 ntBASIC8.42□□□□□ -1.06
SIN3AQ96ST3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC8.42□□□□□ -1.06
SIN3AQ96ST3 MIR3614-201ENST00000581261 86 ntBASIC8.42□□□□□ -1.06
SIN3AQ96ST3 COX6CP7-201ENST00000597056 208 ntBASIC8.42□□□□□ -1.06
SIN3AQ96ST3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.42□□□□□ -1.06
SIN3AQ96ST3 SNORA11.6-201ENST00000619030 128 ntBASIC8.42□□□□□ -1.06
SIN3AQ96ST3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC8.42□□□□□ -1.06
SIN3AQ96ST3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SIN3AQ96ST3 WDR95P-201ENST00000425638 1542 ntBASIC8.42□□□□□ -1.06
SIN3AQ96ST3 RNF19BPY-201ENST00000458209 1550 ntBASIC8.42□□□□□ -1.06
SIN3AQ96ST3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SIN3AQ96ST3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.42□□□□□ -1.06
SIN3AQ96ST3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SIN3AQ96ST3 MRE11P1-201ENST00000464884 2127 ntBASIC8.42□□□□□ -1.06
SIN3AQ96ST3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SIN3AQ96ST3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC8.42□□□□□ -1.06
SIN3AQ96ST3 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 AC079807.1-201ENST00000429993 481 ntBASIC8.41□□□□□ -1.06
SIN3AQ96ST3 GAPDHP34-201ENST00000432112 823 ntBASIC8.41□□□□□ -1.06
SIN3AQ96ST3 HMGB3P24-201ENST00000433260 622 ntBASIC8.41□□□□□ -1.06
SIN3AQ96ST3 AC073410.1-201ENST00000435125 589 ntBASIC8.41□□□□□ -1.06
SIN3AQ96ST3 RPS17P15-201ENST00000475609 349 ntBASIC8.41□□□□□ -1.06
SIN3AQ96ST3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 snoU109.5-201ENST00000516231 132 ntBASIC8.41□□□□□ -1.06
SIN3AQ96ST3 RN7SKP248-201ENST00000516278 305 ntBASIC8.41□□□□□ -1.06
SIN3AQ96ST3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 ZNF322P1-201ENST00000568013 1209 ntBASIC8.41□□□□□ -1.06
SIN3AQ96ST3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 MIR6861-201ENST00000618657 64 ntBASIC8.41□□□□□ -1.06
SIN3AQ96ST3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 GTF2IP4-201ENST00000453092 2054 ntBASIC8.41□□□□□ -1.06
SIN3AQ96ST3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
SIN3AQ96ST3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 RNA5SP394-201ENST00000364216 119 ntBASIC8.4□□□□□ -1.06
SIN3AQ96ST3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 RNA5SP91-201ENST00000390902 119 ntBASIC8.4□□□□□ -1.06
SIN3AQ96ST3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 RPS29P14-201ENST00000431518 171 ntBASIC8.4□□□□□ -1.06
SIN3AQ96ST3 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 RSU1P1-201ENST00000453416 441 ntBASIC8.4□□□□□ -1.06
SIN3AQ96ST3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 SCARNA6.1-201ENST00000516989 238 ntBASIC8.4□□□□□ -1.06
SIN3AQ96ST3 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 AC135626.1-201ENST00000556983 435 ntBASIC8.4□□□□□ -1.06
SIN3AQ96ST3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SIN3AQ96ST3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SIN3AQ96ST3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
SIN3AQ96ST3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SIN3AQ96ST3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.07
SIN3AQ96ST3 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 RN7SKP292-201ENST00000365522 317 ntBASIC8.39□□□□□ -1.07
SIN3AQ96ST3 OR7E101P-201ENST00000400428 513 ntBASIC8.39□□□□□ -1.07
SIN3AQ96ST3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 AC073610.1-201ENST00000489971 396 ntBASIC8.39□□□□□ -1.07
SIN3AQ96ST3 GAPDHP71-201ENST00000511530 1003 ntBASIC8.39□□□□□ -1.07
SIN3AQ96ST3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SIN3AQ96ST3 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 SNORA64.1-201ENST00000362600 132 ntBASIC8.38□□□□□ -1.07
SIN3AQ96ST3 HMGB1P20-201ENST00000402555 677 ntBASIC8.38□□□□□ -1.07
SIN3AQ96ST3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 DUTP1-201ENST00000493631 470 ntBASIC8.38□□□□□ -1.07
SIN3AQ96ST3 AC021678.3-201ENST00000517893 476 ntBASIC8.38□□□□□ -1.07
SIN3AQ96ST3 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms