Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
HPS1Q92902 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
HPS1Q92902 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC7.63□□□□□ -1.19
HPS1Q92902 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 RLIMP2-201ENST00000427891 1563 ntBASIC7.63□□□□□ -1.19
HPS1Q92902 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC7.63□□□□□ -1.19
HPS1Q92902 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC7.63□□□□□ -1.19
HPS1Q92902 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
HPS1Q92902 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
HPS1Q92902 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.62□□□□□ -1.19
HPS1Q92902 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
HPS1Q92902 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.62□□□□□ -1.19
HPS1Q92902 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.62□□□□□ -1.19
HPS1Q92902 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 CD300LD-201ENST00000375352 1303 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
HPS1Q92902 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.62□□□□□ -1.19
HPS1Q92902 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC7.62□□□□□ -1.19
HPS1Q92902 Y_RNA.387-201ENST00000383918 102 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 MIR637-201ENST00000385000 99 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 IGLV3-1-201ENST00000390319 398 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
HPS1Q92902 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 RAB5CP1-201ENST00000395972 580 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 PSMA6P1-201ENST00000400275 741 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 PEX12P1-201ENST00000400284 1048 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AL121977.1-201ENST00000401636 979 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AC245452.3-201ENST00000413294 162 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.62□□□□□ -1.19
HPS1Q92902 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.62□□□□□ -1.19
HPS1Q92902 AC006065.1-201ENST00000422539 802 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 RPL5P34-201ENST00000426545 891 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 MYL6BP1-201ENST00000429485 615 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 VDAC1P6-201ENST00000430062 855 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 GTF2IP20-201ENST00000431663 360 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AC234064.1-201ENST00000436312 247 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.62□□□□□ -1.19
HPS1Q92902 PGBD4P3-201ENST00000440731 581 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AP000532.1-201ENST00000440999 177 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC7.62□□□□□ -1.19
HPS1Q92902 CYP4F25P-201ENST00000446871 520 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC7.62□□□□□ -1.19
HPS1Q92902 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC7.62□□□□□ -1.19
HPS1Q92902 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.62□□□□□ -1.19
HPS1Q92902 MTCO3P20-201ENST00000454926 688 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 EIF3LP2-201ENST00000457262 807 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 RNU6-1208P-201ENST00000459588 107 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 RPS4XP19-201ENST00000460237 736 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AC009108.1-201ENST00000473913 796 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 PLA2G12AP1-201ENST00000497678 568 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AL158819.1-201ENST00000514681 398 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 RNA5SP287-201ENST00000516358 103 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 HMGB1P41-201ENST00000520234 440 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AP005902.1-201ENST00000521358 186 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.62□□□□□ -1.19
HPS1Q92902 IGKV3-25-201ENST00000523155 253 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 OR4A45P-201ENST00000529954 901 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AP000866.3-201ENST00000534607 433 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 RTN4IP1-204ENST00000539449 814 ntTSL 2 BASIC7.62□□□□□ -1.19
HPS1Q92902 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.62□□□□□ -1.19
HPS1Q92902 LINC02373-201ENST00000549261 423 ntTSL 3 BASIC7.62□□□□□ -1.19
HPS1Q92902 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC7.62□□□□□ -1.19
HPS1Q92902 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.62□□□□□ -1.19
HPS1Q92902 LINC01444-202ENST00000581211 654 ntTSL 3 BASIC7.62□□□□□ -1.19
HPS1Q92902 H3F3BP2-201ENST00000583907 357 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AC020907.2-202ENST00000592174 728 ntTSL 3 BASIC7.62□□□□□ -1.19
HPS1Q92902 AC090948.2-201ENST00000607363 564 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC7.62□□□□□ -1.19
HPS1Q92902 PCDH18-206ENST00000611581 819 ntTSL 4 BASIC7.62□□□□□ -1.19
HPS1Q92902 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AL590491.1-202ENST00000618038 394 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 RNF212B-202ENST00000399910 1670 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
HPS1Q92902 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.62□□□□□ -1.19
HPS1Q92902 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 UGT2B25P-201ENST00000511504 1586 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 AC007923.2-201ENST00000584218 1591 ntBASIC7.62□□□□□ -1.19
HPS1Q92902 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HPS1Q92902 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.61□□□□□ -1.19
HPS1Q92902 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HPS1Q92902 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HPS1Q92902 LRRC4-201ENST00000249363 3828 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HPS1Q92902 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms