Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 RNU6-83P-201ENST00000384568 112 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 MIR191-201ENST00000384873 92 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 RN7SKP273-201ENST00000411392 314 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 USP9YP33-201ENST00000412220 421 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 RPSAP60-201ENST00000415403 880 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 RPL7P30-201ENST00000420888 709 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 EIF1P1-201ENST00000421436 341 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC018804.1-201ENST00000430381 618 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC096632.2-201ENST00000438139 1239 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 CNOT7P2-201ENST00000441051 832 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 MTCO1P48-201ENST00000448024 1096 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AL118496.2-201ENST00000448300 230 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC044810.1-201ENST00000480271 711 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 MINOS1P4-201ENST00000515470 318 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 IGLC4-201ENST00000517690 248 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 OR7E154P-201ENST00000525174 932 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 OR4A17P-201ENST00000526032 904 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 MIR378C-201ENST00000578683 81 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 DHFRP1-201ENST00000579682 559 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 FAM60CP-201ENST00000591086 664 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC104184.1-201ENST00000607513 721 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 MIR6780B-201ENST00000610307 79 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC122133.1-201ENST00000613964 233 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 MRPL57P3-201ENST00000619218 176 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 AC007603.3-201ENST00000636915 979 ntBASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.35□□□□□ -1.23
SHKBP1Q8TBC3 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 CDY19P-201ENST00000411668 1613 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 CDY18P-201ENST00000438294 1609 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AC127070.3-201ENST00000503695 3263 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 RNU6-553P-201ENST00000364047 96 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 SUMO2P13-201ENST00000403109 272 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AC099535.1-201ENST00000408928 371 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 RPLP1P10-201ENST00000413972 339 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 SPATA20P1-201ENST00000423089 438 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AC021876.1-201ENST00000425959 359 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AL593851.1-201ENST00000426171 157 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AP000936.2-201ENST00000447151 681 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 OR51P1P-201ENST00000447547 942 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 MRPL42P4-201ENST00000453267 443 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 NMNAT1P3-201ENST00000457517 888 ntBASIC7.34□□□□□ -1.23
SHKBP1Q8TBC3 GLRXP3-201ENST00000470810 321 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms