Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 RPL21P132-201ENST00000331267 462 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 EEF1GP6-201ENST00000402309 905 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC231533.2-201ENST00000419045 978 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 MTCO1P54-201ENST00000430139 712 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 RPL29P7-201ENST00000440227 457 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AL136454.1-201ENST00000443181 466 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC010240.2-201ENST00000445363 1205 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 OR13C1P-201ENST00000457612 963 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 ARPC3P2-201ENST00000457786 533 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC087312.1-201ENST00000471411 480 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 PIGFP1-201ENST00000519180 653 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 KCTD9P6-201ENST00000522306 950 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 HSPA8P13-201ENST00000523715 472 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 GZMB-205ENST00000526004 819 ntTSL 3 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 SSR2-215ENST00000529008 849 ntTSL 5 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 OR5AP1P-201ENST00000529730 940 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC007424.1-203ENST00000554613 687 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AL133255.1-201ENST00000606374 441 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AP005137.2-201ENST00000609238 400 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AP000648.2-201ENST00000624182 404 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC079228.1-201ENST00000624774 1049 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 ZNF300P1-201ENST00000356555 1822 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 MRPS17P1-201ENST00000596009 3130 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AC009108.3-201ENST00000602739 3515 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 AL591848.3-201ENST00000570141 2968 ntBASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCUBE3Q8IX30 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AL031123.2-201ENST00000563225 3325 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AL049776.1-201ENST00000624600 2025 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 OR2M1P-201ENST00000318104 951 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 SNORD81.2-201ENST00000365153 76 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 RNU6-1160P-201ENST00000384546 104 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 MIR128-2-201ENST00000384893 84 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 SNRPEP2-201ENST00000397592 279 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 PTP4A1P1-201ENST00000420539 515 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 RPL19P21-201ENST00000424919 591 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 MTCO3P21-201ENST00000430791 643 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 UBE2FP3-201ENST00000436366 524 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 CALM1P1-201ENST00000442082 433 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 YWHAQP9-201ENST00000445891 512 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 CEACAMP5-201ENST00000448037 961 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 GCNT1P5-201ENST00000449274 682 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 NDUFB4P1-201ENST00000462398 381 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 RPL39P36-201ENST00000490784 156 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms