Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 THAP12P3-201ENST00000456373 2266 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AL136298.2-201ENST00000556497 1570 ntBASIC6.61□□□□□ -1.35
ATG4DQ86TL0 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4DQ86TL0 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 VTA1P1-201ENST00000414044 866 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 TCEA1P4-201ENST00000415066 844 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC008173.1-201ENST00000418901 264 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 GRPEL2P2-201ENST00000421856 670 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 ISCA1P1-201ENST00000426679 387 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL136231.1-201ENST00000429407 730 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 HMGB1P31-201ENST00000437242 427 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL606662.1-201ENST00000445763 553 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 PMS2P11-201ENST00000451831 574 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 RN7SL791P-201ENST00000467868 295 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 RN7SL145P-201ENST00000469955 296 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC106760.2-201ENST00000504159 619 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 OR7E163P-201ENST00000505943 894 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 MRPL49P1-201ENST00000505951 535 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC046134.1-201ENST00000514454 666 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 OR7E154P-201ENST00000525174 932 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 OR4A1P-201ENST00000532342 920 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC012435.1-202ENST00000568772 240 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 MIR5010-201ENST00000582846 120 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 MIR3159-201ENST00000584572 74 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC006539.2-201ENST00000601729 572 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL117336.2-201ENST00000602435 335 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC023513.1-201ENST00000604396 691 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AP000942.4-201ENST00000604811 241 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL355333.1-201ENST00000605632 279 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC093838.1-201ENST00000613014 469 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL121809.2-201ENST00000613169 341 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 FAM27E3-202ENST00000614611 340 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 KARSP2-201ENST00000415696 1639 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL353763.1-201ENST00000624467 1628 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 MFSD8-217ENST00000641178 4374 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AL157713.1-201ENST00000379752 1531 ntBASIC6.6□□□□□ -1.35
ATG4DQ86TL0 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.6□□□□□ -1.35
ATG4DQ86TL0 AC017002.4-201ENST00000604721 1525 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms