Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 OR52Y1P-201ENST00000452418 828 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC239798.3-201ENST00000454459 408 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 RN7SL165P-201ENST00000477476 291 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 RN7SL654P-201ENST00000479178 292 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC016687.1-201ENST00000482574 353 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 RN7SL629P-201ENST00000489622 285 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 RPS23P1-201ENST00000491662 432 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 HMGN1P16-201ENST00000508308 283 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 RNA5SP441-201ENST00000516809 88 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC124891.1-201ENST00000536322 519 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC073916.1-201ENST00000545095 130 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AP000619.2-201ENST00000546014 969 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AP003115.1-201ENST00000569849 463 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AL078601.3-201ENST00000573303 535 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC012175.1-201ENST00000603755 531 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AL356986.1-201ENST00000604085 341 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 OR7M1P-201ENST00000608946 533 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC005514.1-201ENST00000623521 208 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 HPVC1-201ENST00000629899 1198 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 MTCO1P28-201ENST00000574177 1528 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 ZNF806-201ENST00000438300 1774 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC068870.3-201ENST00000625077 2536 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC073429.2-201ENST00000569694 1444 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC105235.1-201ENST00000623208 1816 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 MIR323A-201ENST00000362199 86 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 SNORA38B-201ENST00000363524 131 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 RN7SKP161-201ENST00000411110 305 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 GTF3AP1-201ENST00000416942 1004 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 RPS17P17-201ENST00000419392 409 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 Z85994.2-201ENST00000434327 452 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AL121578.2-201ENST00000448797 447 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 MTND2P3-201ENST00000452458 470 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 RPL23AP64-201ENST00000469465 435 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 RN7SL216P-201ENST00000471607 298 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AP006245.2-201ENST00000522004 300 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC140063.1-201ENST00000541343 259 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AC005520.3-201ENST00000602874 370 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 SMIM12P1-201ENST00000603004 274 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 BUB1P1-201ENST00000603541 607 ntBASIC5.3□□□□□ -1.56
PDLIM3Q53GG5 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms