Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
NKX6-1P78426 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
NKX6-1P78426 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.02□□□□□ -1.45
NKX6-1P78426 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.02□□□□□ -1.45
NKX6-1P78426 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NKX6-1P78426 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NKX6-1P78426 RN7SKP189-201ENST00000365042 330 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.02□□□□□ -1.45
NKX6-1P78426 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NKX6-1P78426 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NKX6-1P78426 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NKX6-1P78426 RN7SKP62-201ENST00000384539 329 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 RNU6-1263P-201ENST00000384601 106 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AL590762.1-201ENST00000391782 432 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AC026310.1-201ENST00000396004 378 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.02□□□□□ -1.45
NKX6-1P78426 OR51B3P-201ENST00000412287 913 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.02□□□□□ -1.45
NKX6-1P78426 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.02□□□□□ -1.45
NKX6-1P78426 AL592310.1-201ENST00000414330 671 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 HIGD1AP15-201ENST00000416198 280 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 NANOGP5-201ENST00000424456 877 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.02□□□□□ -1.45
NKX6-1P78426 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NKX6-1P78426 MYL6P3-201ENST00000436904 432 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 HMGN1P6-201ENST00000438508 291 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.02□□□□□ -1.45
NKX6-1P78426 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.02□□□□□ -1.45
NKX6-1P78426 CALM1P2-201ENST00000452941 448 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NKX6-1P78426 AP000805.1-201ENST00000471604 784 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 RN7SL70P-201ENST00000478322 302 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 RNU6-1308P-201ENST00000516817 103 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 IGKV2D-38-201ENST00000518423 240 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.02□□□□□ -1.45
NKX6-1P78426 MTND2P38-201ENST00000522536 667 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 MORF4L1P3-201ENST00000525966 950 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.02□□□□□ -1.45
NKX6-1P78426 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.02□□□□□ -1.45
NKX6-1P78426 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NKX6-1P78426 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.02□□□□□ -1.45
NKX6-1P78426 AC011611.5-201ENST00000552477 578 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC6.02□□□□□ -1.45
NKX6-1P78426 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.02□□□□□ -1.45
NKX6-1P78426 ZNF971P-201ENST00000562068 1249 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.02□□□□□ -1.45
NKX6-1P78426 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.02□□□□□ -1.45
NKX6-1P78426 AC011921.2-201ENST00000589465 152 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NKX6-1P78426 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.02□□□□□ -1.45
NKX6-1P78426 AC234772.3-201ENST00000602277 528 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AC022022.2-201ENST00000602989 360 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AL160237.3-201ENST00000604114 1013 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.02□□□□□ -1.45
NKX6-1P78426 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.02□□□□□ -1.45
NKX6-1P78426 AC009159.2-201ENST00000617603 606 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AL591926.1-201ENST00000620542 217 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AC073593.1-201ENST00000624500 411 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AC103703.1-201ENST00000634783 663 ntBASIC6.02□□□□□ -1.45
NKX6-1P78426 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.02□□□□□ -1.45
NKX6-1P78426 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
NKX6-1P78426 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.02□□□□□ -1.45
NKX6-1P78426 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NKX6-1P78426 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NKX6-1P78426 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.02□□□□□ -1.45
NKX6-1P78426 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.02□□□□□ -1.45
NKX6-1P78426 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.02□□□□□ -1.45
NKX6-1P78426 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NKX6-1P78426 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
NKX6-1P78426 FBXL21-201ENST00000297158 1305 ntBASIC6.01□□□□□ -1.45
NKX6-1P78426 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NKX6-1P78426 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
NKX6-1P78426 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
NKX6-1P78426 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
NKX6-1P78426 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NKX6-1P78426 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NKX6-1P78426 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.01□□□□□ -1.45
NKX6-1P78426 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
NKX6-1P78426 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.01□□□□□ -1.45
NKX6-1P78426 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NKX6-1P78426 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NKX6-1P78426 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NKX6-1P78426 AC007406.5-201ENST00000570140 3170 ntBASIC6.01□□□□□ -1.45
NKX6-1P78426 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NKX6-1P78426 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
NKX6-1P78426 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NKX6-1P78426 RNA5SP382-201ENST00000363355 112 ntBASIC6.01□□□□□ -1.45
NKX6-1P78426 RNU4-7P-201ENST00000364758 141 ntBASIC6.01□□□□□ -1.45
NKX6-1P78426 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
NKX6-1P78426 SNORA7A-201ENST00000384765 139 ntBASIC6.01□□□□□ -1.45
NKX6-1P78426 MIR142-201ENST00000384835 87 ntBASIC6.01□□□□□ -1.45
NKX6-1P78426 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
NKX6-1P78426 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
NKX6-1P78426 AC092642.1-201ENST00000392417 425 ntBASIC6.01□□□□□ -1.45
NKX6-1P78426 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.01□□□□□ -1.45
NKX6-1P78426 RPL5P19-201ENST00000404228 893 ntBASIC6.01□□□□□ -1.45
NKX6-1P78426 PCNPP4-201ENST00000414817 517 ntBASIC6.01□□□□□ -1.45
NKX6-1P78426 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.01□□□□□ -1.45
NKX6-1P78426 AC009506.2-201ENST00000420635 840 ntBASIC6.01□□□□□ -1.45
NKX6-1P78426 AC000089.1-201ENST00000424559 801 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms