Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RN7SKP77-201ENST00000363261 353 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.85□□□□□ -1.31
CCNA1P78396 HMGB1P20-201ENST00000402555 677 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.85□□□□□ -1.31
CCNA1P78396 BMS1P17-202ENST00000416720 316 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CCNA1P78396 AL445928.1-201ENST00000435545 222 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 AC073909.1-201ENST00000447112 999 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.85□□□□□ -1.31
CCNA1P78396 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.85□□□□□ -1.31
CCNA1P78396 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CCNA1P78396 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCNA1P78396 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNA1P78396 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.85□□□□□ -1.31
CCNA1P78396 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.85□□□□□ -1.31
CCNA1P78396 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.85□□□□□ -1.31
CCNA1P78396 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.85□□□□□ -1.31
CCNA1P78396 RN7SL544P-201ENST00000617232 284 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 RN7SL763P-201ENST00000620922 284 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 AC022726.2-201ENST00000634673 547 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 AC003992.1-201ENST00000635364 557 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
CCNA1P78396 AC087565.3-203ENST00000641018 837 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCNA1P78396 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CCNA1P78396 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCNA1P78396 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CCNA1P78396 TNPO1P2-201ENST00000426249 2665 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 AC011369.2-201ENST00000624423 1567 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCNA1P78396 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNA1P78396 AC079753.1-201ENST00000623243 3868 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNA1P78396 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNA1P78396 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCNA1P78396 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.85□□□□□ -1.31
CCNA1P78396 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCNA1P78396 DOCK11P1-201ENST00000553480 5932 ntBASIC6.85□□□□□ -1.31
CCNA1P78396 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCNA1P78396 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNA1P78396 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
CCNA1P78396 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCNA1P78396 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNA1P78396 AL662795.2-201ENST00000624252 3706 ntBASIC6.84□□□□□ -1.31
CCNA1P78396 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNA1P78396 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.84□□□□□ -1.31
CCNA1P78396 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNA1P78396 CCNT2P1-201ENST00000423082 1315 ntBASIC6.84□□□□□ -1.31
CCNA1P78396 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CCNA1P78396 RNA5SP394-201ENST00000364216 119 ntBASIC6.84□□□□□ -1.31
CCNA1P78396 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
CCNA1P78396 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNA1P78396 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.84□□□□□ -1.31
CCNA1P78396 AC127526.2-201ENST00000426436 775 ntBASIC6.84□□□□□ -1.31
CCNA1P78396 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.84□□□□□ -1.31
CCNA1P78396 RAB28P2-201ENST00000454299 641 ntBASIC6.84□□□□□ -1.31
CCNA1P78396 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.84□□□□□ -1.31
CCNA1P78396 AC104164.1-201ENST00000460282 590 ntBASIC6.84□□□□□ -1.31
CCNA1P78396 AC138866.2-201ENST00000508650 584 ntBASIC6.84□□□□□ -1.31
CCNA1P78396 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.84□□□□□ -1.31
CCNA1P78396 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNA1P78396 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCNA1P78396 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.84□□□□□ -1.31
CCNA1P78396 AL034374.2-201ENST00000605281 548 ntBASIC6.84□□□□□ -1.31
CCNA1P78396 AL139099.4-201ENST00000614802 114 ntBASIC6.84□□□□□ -1.31
CCNA1P78396 CASC19-243ENST00000641588 1546 ntBASIC6.84□□□□□ -1.31
CCNA1P78396 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCNA1P78396 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCNA1P78396 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.84□□□□□ -1.31
CCNA1P78396 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.84□□□□□ -1.31
CCNA1P78396 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.84□□□□□ -1.32
CCNA1P78396 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.84□□□□□ -1.32
CCNA1P78396 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CCNA1P78396 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.83□□□□□ -1.32
CCNA1P78396 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCNA1P78396 BX284613.1-201ENST00000452221 1641 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCNA1P78396 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.83□□□□□ -1.32
CCNA1P78396 AL132656.3-201ENST00000606384 1595 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCNA1P78396 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.83□□□□□ -1.32
CCNA1P78396 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCNA1P78396 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCNA1P78396 AC011815.2-201ENST00000618230 2021 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.83□□□□□ -1.32
CCNA1P78396 GAPDHP24-201ENST00000328713 983 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 MIR105-2-201ENST00000385083 81 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.83□□□□□ -1.32
CCNA1P78396 AL355433.1-201ENST00000422804 300 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.83□□□□□ -1.32
CCNA1P78396 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.83□□□□□ -1.32
CCNA1P78396 Z84478.1-201ENST00000438230 1219 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 RPS7P3-201ENST00000443360 580 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 RN7SL352P-201ENST00000466002 277 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 AC008429.4-201ENST00000521201 182 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 AC090651.1-201ENST00000567865 634 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 OOSP1P2-201ENST00000579644 351 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 AC119403.2-201ENST00000590960 598 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 AC020916.2-201ENST00000591242 360 ntBASIC6.83□□□□□ -1.32
CCNA1P78396 AC079395.2-201ENST00000610982 737 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms