Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN18P56856 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN18P56856 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 AL161912.4-201ENST00000623889 2468 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN18P56856 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN18P56856 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CLDN18P56856 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 OR10R3P-201ENST00000361688 942 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLDN18P56856 LYPLA1P3-201ENST00000402650 695 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 TMA16P2-201ENST00000413187 601 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 AL354890.1-201ENST00000413730 346 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 BX284632.2-201ENST00000421091 399 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN18P56856 CDY8P-201ENST00000428380 1279 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 VN1R110P-201ENST00000438988 971 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 AL512605.1-202ENST00000441919 381 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 AL359955.2-201ENST00000445380 353 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 CDY20P-201ENST00000447528 1279 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 GEMIN2P1-201ENST00000454246 752 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 RAB28P2-201ENST00000454299 641 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 AC083795.1-201ENST00000491760 320 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.41□□□□□ -1.54
CLDN18P56856 AC006499.4-201ENST00000510947 694 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.41□□□□□ -1.54
CLDN18P56856 OR7E158P-201ENST00000524483 910 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 AC110056.1-201ENST00000525759 911 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN18P56856 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN18P56856 AL136131.3-201ENST00000607600 188 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 AP001962.1-201ENST00000624114 559 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 AL162377.2-201ENST00000624532 337 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN18P56856 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 OLMALINC-203ENST00000641087 3779 ntBASIC5.41□□□□□ -1.54
CLDN18P56856 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN18P56856 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CLDN18P56856 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLDN18P56856 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN18P56856 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN18P56856 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN18P56856 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN18P56856 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN18P56856 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN18P56856 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN18P56856 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
CLDN18P56856 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN18P56856 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CLDN18P56856 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN18P56856 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLDN18P56856 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN18P56856 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLDN18P56856 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.4□□□□□ -1.54
CLDN18P56856 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CLDN18P56856 RN7SKP151-201ENST00000410230 316 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 AC116036.1-201ENST00000412199 367 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN18P56856 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN18P56856 AC117434.1-201ENST00000419971 836 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 NMD3P2-201ENST00000421815 761 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN18P56856 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN18P56856 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.4□□□□□ -1.54
CLDN18P56856 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN18P56856 NDUFS5P5-201ENST00000437256 321 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN18P56856 H3F3BP1-201ENST00000440551 403 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 RPL7L1P3-201ENST00000455249 689 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 AC084754.1-201ENST00000463466 464 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 RN7SL352P-201ENST00000466002 277 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 AC023245.1-201ENST00000468501 517 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 AC012123.2-201ENST00000485809 248 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 AC026782.2-201ENST00000510845 636 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN18P56856 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLDN18P56856 TPM3P3-201ENST00000521343 354 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.4□□□□□ -1.54
CLDN18P56856 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN18P56856 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN18P56856 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN18P56856 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN18P56856 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN18P56856 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN18P56856 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN18P56856 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.4□□□□□ -1.54
CLDN18P56856 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN18P56856 AC027334.1-201ENST00000603257 310 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 LSM1P2-201ENST00000604911 322 ntBASIC5.4□□□□□ -1.54
CLDN18P56856 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CLDN18P56856 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms