Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC8.21□□□□□ -1.1
CLTCL1P53675 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLTCL1P53675 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLTCL1P53675 AC009831.5-201ENST00000624000 3189 ntBASIC8.21□□□□□ -1.1
CLTCL1P53675 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CLTCL1P53675 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLTCL1P53675 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CLTCL1P53675 RNA5-8SP5-201ENST00000365304 152 ntBASIC8.21□□□□□ -1.1
CLTCL1P53675 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLTCL1P53675 GAPDHP42-201ENST00000406848 981 ntBASIC8.21□□□□□ -1.1
CLTCL1P53675 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC8.21□□□□□ -1.1
CLTCL1P53675 RNU4-34P-201ENST00000410431 124 ntBASIC8.21□□□□□ -1.1
CLTCL1P53675 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC8.21□□□□□ -1.1
CLTCL1P53675 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC8.21□□□□□ -1.1
CLTCL1P53675 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CLTCL1P53675 RPS4XP1-201ENST00000482189 787 ntBASIC8.21□□□□□ -1.1
CLTCL1P53675 IGHVIII-76-1-201ENST00000523776 286 ntBASIC8.21□□□□□ -1.1
CLTCL1P53675 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC8.21□□□□□ -1.1
CLTCL1P53675 AC008536.1-201ENST00000602872 669 ntBASIC8.21□□□□□ -1.1
CLTCL1P53675 AC000068.2-201ENST00000608816 460 ntBASIC8.21□□□□□ -1.1
CLTCL1P53675 AC068870.2-201ENST00000620635 389 ntBASIC8.21□□□□□ -1.1
CLTCL1P53675 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLTCL1P53675 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CLTCL1P53675 AC137056.2-201ENST00000624055 1958 ntBASIC8.21□□□□□ -1.1
CLTCL1P53675 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CLTCL1P53675 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
CLTCL1P53675 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLTCL1P53675 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CLTCL1P53675 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC8.2□□□□□ -1.1
CLTCL1P53675 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CLTCL1P53675 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLTCL1P53675 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLTCL1P53675 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC8.2□□□□□ -1.1
CLTCL1P53675 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLTCL1P53675 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLTCL1P53675 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CLTCL1P53675 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLTCL1P53675 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.2□□□□□ -1.1
CLTCL1P53675 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLTCL1P53675 CASC19-243ENST00000641588 1546 ntBASIC8.2□□□□□ -1.1
CLTCL1P53675 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.2□□□□□ -1.1
CLTCL1P53675 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CLTCL1P53675 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.2□□□□□ -1.1
CLTCL1P53675 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC8.2□□□□□ -1.1
CLTCL1P53675 AURKAPS1-201ENST00000451805 1212 ntBASIC8.2□□□□□ -1.1
CLTCL1P53675 TRBV5-2-201ENST00000489095 273 ntBASIC8.2□□□□□ -1.1
CLTCL1P53675 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC8.2□□□□□ -1.1
CLTCL1P53675 MIR2117-201ENST00000516780 80 ntBASIC8.2□□□□□ -1.1
CLTCL1P53675 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
CLTCL1P53675 AC126177.5-201ENST00000549599 178 ntBASIC8.2□□□□□ -1.1
CLTCL1P53675 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.2□□□□□ -1.1
CLTCL1P53675 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.2□□□□□ -1.1
CLTCL1P53675 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC8.2□□□□□ -1.1
CLTCL1P53675 MVP-219ENST00000629059 120 ntTSL 5 BASIC8.2□□□□□ -1.1
CLTCL1P53675 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC8.2□□□□□ -1.1
CLTCL1P53675 CASC19-264ENST00000641912 1184 ntBASIC8.2□□□□□ -1.1
CLTCL1P53675 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC8.2□□□□□ -1.1
CLTCL1P53675 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
CLTCL1P53675 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLTCL1P53675 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CLTCL1P53675 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CLTCL1P53675 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.19□□□□□ -1.1
CLTCL1P53675 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CLTCL1P53675 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CLTCL1P53675 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CLTCL1P53675 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.19□□□□□ -1.1
CLTCL1P53675 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC8.19□□□□□ -1.1
CLTCL1P53675 FAR2P1-206ENST00000449736 709 ntBASIC8.19□□□□□ -1.1
CLTCL1P53675 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC8.19□□□□□ -1.1
CLTCL1P53675 AL355032.1-201ENST00000472981 438 ntBASIC8.19□□□□□ -1.1
CLTCL1P53675 AC004815.1-201ENST00000484185 331 ntBASIC8.19□□□□□ -1.1
CLTCL1P53675 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC8.19□□□□□ -1.1
CLTCL1P53675 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC8.19□□□□□ -1.1
CLTCL1P53675 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.19□□□□□ -1.1
CLTCL1P53675 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC8.19□□□□□ -1.1
CLTCL1P53675 HAUS8P1-201ENST00000549005 542 ntBASIC8.19□□□□□ -1.1
CLTCL1P53675 AC044860.2-201ENST00000561005 179 ntBASIC8.19□□□□□ -1.1
CLTCL1P53675 TAS2R6P-201ENST00000605022 826 ntBASIC8.19□□□□□ -1.1
CLTCL1P53675 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
CLTCL1P53675 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CLTCL1P53675 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CLTCL1P53675 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CLTCL1P53675 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CLTCL1P53675 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.18□□□□□ -1.1
CLTCL1P53675 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC8.18□□□□□ -1.1
CLTCL1P53675 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms