Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.56□□□□□ -1.52
SOX2P48431 RRM2P4-201ENST00000441721 562 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AL096829.2-201ENST00000446582 742 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AL157884.3-201ENST00000448273 1184 ntBASIC5.56□□□□□ -1.52
SOX2P48431 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX2P48431 CCRL1P1-201ENST00000449542 1053 ntBASIC5.56□□□□□ -1.52
SOX2P48431 RPL23AP23-201ENST00000452590 471 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.56□□□□□ -1.52
SOX2P48431 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX2P48431 SETP6-201ENST00000479329 568 ntBASIC5.56□□□□□ -1.52
SOX2P48431 RN7SL423P-201ENST00000486202 304 ntBASIC5.56□□□□□ -1.52
SOX2P48431 RPL21P42-201ENST00000488408 464 ntBASIC5.56□□□□□ -1.52
SOX2P48431 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX2P48431 RPL10P7-201ENST00000495649 625 ntBASIC5.56□□□□□ -1.52
SOX2P48431 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SOX2P48431 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.56□□□□□ -1.52
SOX2P48431 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.56□□□□□ -1.52
SOX2P48431 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.56□□□□□ -1.52
SOX2P48431 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.56□□□□□ -1.52
SOX2P48431 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SOX2P48431 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.56□□□□□ -1.52
SOX2P48431 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.56□□□□□ -1.52
SOX2P48431 AC090666.1-201ENST00000578241 445 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AC090616.1-201ENST00000583895 447 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.56□□□□□ -1.52
SOX2P48431 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.56□□□□□ -1.52
SOX2P48431 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX2P48431 AC024085.1-201ENST00000604299 432 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AP004372.1-201ENST00000604842 844 ntBASIC5.56□□□□□ -1.52
SOX2P48431 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AL021368.3-201ENST00000607119 578 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.56□□□□□ -1.52
SOX2P48431 AC015922.4-201ENST00000612568 690 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AC140725.3-201ENST00000616193 880 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AC019080.5-201ENST00000624891 757 ntBASIC5.56□□□□□ -1.52
SOX2P48431 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.56□□□□□ -1.52
SOX2P48431 FRG1DP-201ENST00000635586 771 ntBASIC5.56□□□□□ -1.52
SOX2P48431 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.56□□□□□ -1.52
SOX2P48431 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX2P48431 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SOX2P48431 SNX18P3-202ENST00000565670 1750 ntBASIC5.56□□□□□ -1.52
SOX2P48431 AC126474.2-201ENST00000623268 1750 ntBASIC5.56□□□□□ -1.52
SOX2P48431 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SOX2P48431 GUCY1B2-204ENST00000531898 1979 ntBASIC5.56□□□□□ -1.52
SOX2P48431 Z83820.1-201ENST00000456978 1499 ntBASIC5.56□□□□□ -1.52
SOX2P48431 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
SOX2P48431 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.56□□□□□ -1.52
SOX2P48431 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SOX2P48431 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SOX2P48431 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.56□□□□□ -1.52
SOX2P48431 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
SOX2P48431 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SOX2P48431 AC093844.1-201ENST00000514910 1361 ntBASIC5.55□□□□□ -1.52
SOX2P48431 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX2P48431 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX2P48431 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX2P48431 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SOX2P48431 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SOX2P48431 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 AC245036.1-201ENST00000391727 309 ntBASIC5.55□□□□□ -1.52
SOX2P48431 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.55□□□□□ -1.52
SOX2P48431 FTH1P26-201ENST00000406512 701 ntBASIC5.55□□□□□ -1.52
SOX2P48431 SOD1P1-201ENST00000407803 440 ntBASIC5.55□□□□□ -1.52
SOX2P48431 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX2P48431 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 AL158050.1-201ENST00000416077 457 ntBASIC5.55□□□□□ -1.52
SOX2P48431 AC009303.1-201ENST00000426307 352 ntBASIC5.55□□□□□ -1.52
SOX2P48431 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 AC046176.1-201ENST00000435260 1170 ntBASIC5.55□□□□□ -1.52
SOX2P48431 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 TPTE2P3-201ENST00000441562 1189 ntBASIC5.55□□□□□ -1.52
SOX2P48431 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 AC104164.3-201ENST00000467363 1258 ntBASIC5.55□□□□□ -1.52
SOX2P48431 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX2P48431 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 RPS3AP6-201ENST00000484430 795 ntBASIC5.55□□□□□ -1.52
SOX2P48431 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 AC010409.2-201ENST00000505780 478 ntBASIC5.55□□□□□ -1.52
SOX2P48431 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.55□□□□□ -1.52
SOX2P48431 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SOX2P48431 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 AC111000.6-201ENST00000514471 709 ntBASIC5.55□□□□□ -1.52
SOX2P48431 AC093878.1-201ENST00000515630 432 ntBASIC5.55□□□□□ -1.52
SOX2P48431 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 AC087894.1-201ENST00000538359 518 ntBASIC5.55□□□□□ -1.52
SOX2P48431 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.55□□□□□ -1.52
SOX2P48431 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX2P48431 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX2P48431 AC091932.1-201ENST00000569381 427 ntBASIC5.55□□□□□ -1.52
SOX2P48431 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 MIR4312-201ENST00000579909 76 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms