Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH3P22223 MIR133A2-201ENST00000347538 102 ntBASIC6.02□□□□□ -1.45
CDH3P22223 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.02□□□□□ -1.45
CDH3P22223 RN7SKP108-201ENST00000411367 328 ntBASIC6.02□□□□□ -1.45
CDH3P22223 RPS7P14-201ENST00000426405 583 ntBASIC6.02□□□□□ -1.45
CDH3P22223 AC244033.1-201ENST00000426826 870 ntBASIC6.02□□□□□ -1.45
CDH3P22223 AC115283.1-201ENST00000427353 400 ntBASIC6.02□□□□□ -1.45
CDH3P22223 OR3D1P-201ENST00000438288 955 ntBASIC6.02□□□□□ -1.45
CDH3P22223 PPIAP10-201ENST00000438675 458 ntBASIC6.02□□□□□ -1.45
CDH3P22223 AMYP1-201ENST00000440059 1023 ntBASIC6.02□□□□□ -1.45
CDH3P22223 AL590004.3-202ENST00000445883 451 ntBASIC6.02□□□□□ -1.45
CDH3P22223 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH3P22223 RANP2-201ENST00000456833 229 ntBASIC6.02□□□□□ -1.45
CDH3P22223 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.02□□□□□ -1.45
CDH3P22223 AC022784.5-201ENST00000522241 437 ntBASIC6.02□□□□□ -1.45
CDH3P22223 AC036111.2-201ENST00000533247 901 ntBASIC6.02□□□□□ -1.45
CDH3P22223 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH3P22223 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.02□□□□□ -1.45
CDH3P22223 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.02□□□□□ -1.45
CDH3P22223 GLYATL1P2-202ENST00000588046 902 ntBASIC6.02□□□□□ -1.45
CDH3P22223 AP001823.1-201ENST00000604056 1003 ntBASIC6.02□□□□□ -1.45
CDH3P22223 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.02□□□□□ -1.45
CDH3P22223 AC073389.3-201ENST00000609434 935 ntBASIC6.02□□□□□ -1.45
CDH3P22223 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH3P22223 AC006924.1-201ENST00000610750 559 ntBASIC6.02□□□□□ -1.45
CDH3P22223 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.02□□□□□ -1.45
CDH3P22223 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH3P22223 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH3P22223 AC073869.7-201ENST00000640874 297 ntBASIC6.02□□□□□ -1.45
CDH3P22223 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
CDH3P22223 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH3P22223 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH3P22223 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CDH3P22223 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
CDH3P22223 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CDH3P22223 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH3P22223 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.02□□□□□ -1.45
CDH3P22223 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH3P22223 AC092451.3-201ENST00000625067 1343 ntBASIC6.01□□□□□ -1.45
CDH3P22223 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH3P22223 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.01□□□□□ -1.45
CDH3P22223 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CDH3P22223 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CDH3P22223 GUCY1B2-204ENST00000531898 1979 ntBASIC6.01□□□□□ -1.45
CDH3P22223 AL133243.2-201ENST00000610331 1621 ntBASIC6.01□□□□□ -1.45
CDH3P22223 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDH3P22223 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDH3P22223 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDH3P22223 GNG5P2-201ENST00000372054 207 ntBASIC6.01□□□□□ -1.45
CDH3P22223 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.01□□□□□ -1.45
CDH3P22223 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.01□□□□□ -1.45
CDH3P22223 RPS20P25-201ENST00000412447 352 ntBASIC6.01□□□□□ -1.45
CDH3P22223 AL354868.1-201ENST00000417077 482 ntBASIC6.01□□□□□ -1.45
CDH3P22223 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH3P22223 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH3P22223 RPL6P30-201ENST00000443382 862 ntBASIC6.01□□□□□ -1.45
CDH3P22223 RPL34P33-201ENST00000486062 334 ntBASIC6.01□□□□□ -1.45
CDH3P22223 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH3P22223 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.01□□□□□ -1.45
CDH3P22223 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH3P22223 Y_RNA.710-201ENST00000516975 110 ntBASIC6.01□□□□□ -1.45
CDH3P22223 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CDH3P22223 AC005363.1-201ENST00000530779 351 ntBASIC6.01□□□□□ -1.45
CDH3P22223 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH3P22223 AC073916.1-201ENST00000545095 130 ntBASIC6.01□□□□□ -1.45
CDH3P22223 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH3P22223 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.01□□□□□ -1.45
CDH3P22223 AC007346.1-201ENST00000569208 867 ntBASIC6.01□□□□□ -1.45
CDH3P22223 MTATP6P25-201ENST00000574491 261 ntBASIC6.01□□□□□ -1.45
CDH3P22223 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.01□□□□□ -1.45
CDH3P22223 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.01□□□□□ -1.45
CDH3P22223 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.01□□□□□ -1.45
CDH3P22223 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH3P22223 AL080312.2-201ENST00000613001 630 ntBASIC6.01□□□□□ -1.45
CDH3P22223 AC024255.1-201ENST00000614376 102 ntBASIC6.01□□□□□ -1.45
CDH3P22223 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.01□□□□□ -1.45
CDH3P22223 RFPL4AP6-201ENST00000616792 846 ntBASIC6.01□□□□□ -1.45
CDH3P22223 MIR6778-201ENST00000617912 73 ntBASIC6.01□□□□□ -1.45
CDH3P22223 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH3P22223 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.01□□□□□ -1.45
CDH3P22223 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH3P22223 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CDH3P22223 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH3P22223 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH3P22223 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH3P22223 AP005435.3-201ENST00000531260 3198 ntBASIC6.01□□□□□ -1.45
CDH3P22223 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.01□□□□□ -1.45
CDH3P22223 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms