Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 RPS4XP1-201ENST00000482189 787 ntBASIC8.24□□□□□ -1.09
ATF3P18847 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC8.24□□□□□ -1.09
ATF3P18847 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC8.24□□□□□ -1.09
ATF3P18847 AC104785.1-201ENST00000603220 588 ntBASIC8.24□□□□□ -1.09
ATF3P18847 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC8.24□□□□□ -1.09
ATF3P18847 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
ATF3P18847 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ATF3P18847 CLCA3P-203ENST00000490028 2781 ntBASIC8.24□□□□□ -1.09
ATF3P18847 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
ATF3P18847 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
ATF3P18847 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
ATF3P18847 AC011815.2-201ENST00000618230 2021 ntBASIC8.24□□□□□ -1.09
ATF3P18847 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
ATF3P18847 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ATF3P18847 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
ATF3P18847 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ATF3P18847 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC8.23□□□□□ -1.09
ATF3P18847 AL049634.1-201ENST00000453770 1720 ntBASIC8.23□□□□□ -1.09
ATF3P18847 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.23□□□□□ -1.09
ATF3P18847 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
ATF3P18847 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
ATF3P18847 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC8.23□□□□□ -1.09
ATF3P18847 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
ATF3P18847 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.23□□□□□ -1.09
ATF3P18847 RN7SKP213-201ENST00000410746 298 ntBASIC8.23□□□□□ -1.09
ATF3P18847 AC091390.2-201ENST00000432573 374 ntBASIC8.23□□□□□ -1.09
ATF3P18847 NPM1P48-201ENST00000436002 853 ntBASIC8.23□□□□□ -1.09
ATF3P18847 AL450996.1-201ENST00000445574 1202 ntBASIC8.23□□□□□ -1.09
ATF3P18847 AC073850.1-201ENST00000449243 255 ntBASIC8.23□□□□□ -1.09
ATF3P18847 RANP1-206ENST00000455094 651 ntBASIC8.23□□□□□ -1.09
ATF3P18847 AP002371.1-201ENST00000463604 433 ntBASIC8.23□□□□□ -1.09
ATF3P18847 RPL7AP6-201ENST00000477943 801 ntBASIC8.23□□□□□ -1.09
ATF3P18847 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC8.23□□□□□ -1.09
ATF3P18847 RPSAP50-201ENST00000481955 852 ntBASIC8.23□□□□□ -1.09
ATF3P18847 EIF1P7-201ENST00000487533 337 ntBASIC8.23□□□□□ -1.09
ATF3P18847 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC8.23□□□□□ -1.09
ATF3P18847 RNA5SP228-201ENST00000516232 133 ntBASIC8.23□□□□□ -1.09
ATF3P18847 SNORA48.9-201ENST00000516419 162 ntBASIC8.23□□□□□ -1.09
ATF3P18847 SNORD116-30-201ENST00000516468 85 ntBASIC8.23□□□□□ -1.09
ATF3P18847 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.23□□□□□ -1.09
ATF3P18847 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.23□□□□□ -1.09
ATF3P18847 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
ATF3P18847 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC8.23□□□□□ -1.09
ATF3P18847 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.23□□□□□ -1.09
ATF3P18847 AL445647.2-201ENST00000615170 130 ntBASIC8.23□□□□□ -1.09
ATF3P18847 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
ATF3P18847 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ATF3P18847 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC8.23□□□□□ -1.09
ATF3P18847 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.23□□□□□ -1.09
ATF3P18847 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
ATF3P18847 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
ATF3P18847 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
ATF3P18847 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
ATF3P18847 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
ATF3P18847 SRRM1P3-201ENST00000426911 2678 ntBASIC8.23□□□□□ -1.09
ATF3P18847 AL359091.1-201ENST00000449048 1734 ntBASIC8.23□□□□□ -1.09
ATF3P18847 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
ATF3P18847 AP001541.1-201ENST00000623322 1904 ntBASIC8.23□□□□□ -1.09
ATF3P18847 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.23□□□□□ -1.09
ATF3P18847 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
ATF3P18847 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.22□□□□□ -1.09
ATF3P18847 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.22□□□□□ -1.09
ATF3P18847 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ATF3P18847 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ATF3P18847 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ATF3P18847 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.22□□□□□ -1.09
ATF3P18847 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ATF3P18847 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
ATF3P18847 AC114786.1-201ENST00000512892 1415 ntBASIC8.22□□□□□ -1.09
ATF3P18847 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
ATF3P18847 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ATF3P18847 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ATF3P18847 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
ATF3P18847 SLC35E1P1-201ENST00000419313 864 ntBASIC8.22□□□□□ -1.09
ATF3P18847 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC8.22□□□□□ -1.09
ATF3P18847 HMGB1P32-201ENST00000425971 565 ntBASIC8.22□□□□□ -1.09
ATF3P18847 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC8.22□□□□□ -1.09
ATF3P18847 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC8.22□□□□□ -1.09
ATF3P18847 AC115223.1-201ENST00000466377 870 ntBASIC8.22□□□□□ -1.09
ATF3P18847 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.22□□□□□ -1.09
ATF3P18847 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.22□□□□□ -1.09
ATF3P18847 NRBF2P4-201ENST00000520874 850 ntBASIC8.22□□□□□ -1.09
ATF3P18847 AC024255.1-201ENST00000614376 102 ntBASIC8.22□□□□□ -1.09
ATF3P18847 AL139099.4-201ENST00000614802 114 ntBASIC8.22□□□□□ -1.09
ATF3P18847 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.22□□□□□ -1.09
ATF3P18847 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC8.22□□□□□ -1.09
ATF3P18847 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
ATF3P18847 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.22□□□□□ -1.09
ATF3P18847 AC023421.1-201ENST00000590535 1785 ntBASIC8.22□□□□□ -1.09
ATF3P18847 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
ATF3P18847 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.22□□□□□ -1.09
ATF3P18847 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ATF3P18847 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ATF3P18847 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC8.21□□□□□ -1.09
ATF3P18847 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
ATF3P18847 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.21□□□□□ -1.09
ATF3P18847 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC8.21□□□□□ -1.09
ATF3P18847 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.09
ATF3P18847 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ATF3P18847 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms