Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 SNORA67-201ENST00000384423 137 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AMZ2P2-201ENST00000406819 1057 ntBASIC2.49□□□□□ -2.01
USH2AO75445 NMD3P2-201ENST00000421815 761 ntBASIC2.49□□□□□ -2.01
USH2AO75445 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.49□□□□□ -2.01
USH2AO75445 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.49□□□□□ -2.01
USH2AO75445 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 NIP7P2-201ENST00000485801 544 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 IGHVII-44-2-201ENST00000517728 250 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AC006338.2-201ENST00000616864 791 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AL355974.3-201ENST00000617383 467 ntBASIC2.49□□□□□ -2.01
USH2AO75445 MIR6075-201ENST00000620782 95 ntBASIC2.49□□□□□ -2.01
USH2AO75445 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 FRY-202ENST00000380250 10688 ntTSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 FRY-209ENST00000642040 10697 ntBASIC2.49□□□□□ -2.01
USH2AO75445 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 AC110373.1-201ENST00000505994 3505 ntBASIC2.49□□□□□ -2.01
USH2AO75445 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 RHOT1P3-201ENST00000436571 331 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 AC010618.1-201ENST00000469924 477 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AP002812.1-201ENST00000495378 474 ntBASIC2.49□□□□□ -2.01
USH2AO75445 DPPA3P2-202ENST00000557188 1219 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC2.49□□□□□ -2.01
USH2AO75445 MIR5095-201ENST00000578844 88 ntBASIC2.49□□□□□ -2.01
USH2AO75445 AC125494.2-201ENST00000602431 657 ntBASIC2.49□□□□□ -2.01
USH2AO75445 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
USH2AO75445 PLCG2-207ENST00000564138 8707 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 USP8-204ENST00000425032 3559 ntTSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC2.49□□□□□ -2.01
USH2AO75445 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 AC105235.1-201ENST00000623208 1816 ntBASIC2.49□□□□□ -2.01
USH2AO75445 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC2.49□□□□□ -2.01
USH2AO75445 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.49□□□□□ -2.01
USH2AO75445 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH2AO75445 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
USH2AO75445 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
USH2AO75445 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 AL627171.1-201ENST00000618845 1308 ntBASIC2.48□□□□□ -2.01
USH2AO75445 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 PPP2R2DP1-201ENST00000420526 637 ntBASIC2.48□□□□□ -2.01
USH2AO75445 PSMC1P2-201ENST00000423961 1204 ntBASIC2.48□□□□□ -2.01
USH2AO75445 AL365220.1-201ENST00000432923 399 ntBASIC2.48□□□□□ -2.01
USH2AO75445 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC2.48□□□□□ -2.01
USH2AO75445 AC092490.3-201ENST00000545370 572 ntBASIC2.48□□□□□ -2.01
USH2AO75445 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC2.48□□□□□ -2.01
USH2AO75445 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
USH2AO75445 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 ANKRD50-201ENST00000504087 8794 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
USH2AO75445 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
USH2AO75445 AC112243.1-201ENST00000623949 3851 ntBASIC2.48□□□□□ -2.01
USH2AO75445 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 DISP2-201ENST00000267889 12614 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 TNPO1P2-201ENST00000426249 2665 ntBASIC2.48□□□□□ -2.01
USH2AO75445 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH2AO75445 RNA5SP432-201ENST00000362480 116 ntBASIC2.48□□□□□ -2.01
USH2AO75445 SNORD46.1-201ENST00000364139 104 ntBASIC2.48□□□□□ -2.01
USH2AO75445 ATP5F1P3-201ENST00000397213 657 ntBASIC2.48□□□□□ -2.01
USH2AO75445 RNU2-50P-201ENST00000410494 143 ntBASIC2.48□□□□□ -2.01
USH2AO75445 RN7SKP177-201ENST00000410567 355 ntBASIC2.48□□□□□ -2.01
USH2AO75445 RN7SKP100-201ENST00000411258 284 ntBASIC2.48□□□□□ -2.01
USH2AO75445 RPL12P34-201ENST00000424532 479 ntBASIC2.48□□□□□ -2.01
USH2AO75445 CENPIP1-201ENST00000425713 902 ntBASIC2.48□□□□□ -2.01
USH2AO75445 AC093655.2-201ENST00000425735 631 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms