Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 MIR16-2-201ENST00000362117 81 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 RNA5SP485-201ENST00000365053 119 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 RNU6-1320P-201ENST00000390838 107 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 RNU6-1269P-201ENST00000391139 107 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC245036.1-201ENST00000391727 309 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC017035.1-201ENST00000411999 1115 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC083862.1-201ENST00000427378 1242 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC007383.1-201ENST00000445875 636 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 LDHBP2-201ENST00000456969 1005 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 RNU6-599P-201ENST00000459383 107 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 RNU6-1193P-201ENST00000459461 107 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 RN7SL39P-201ENST00000462264 297 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC022415.1-202ENST00000486612 523 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 CAB39P1-201ENST00000502277 460 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC018645.1-201ENST00000505003 109 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC135983.3-201ENST00000528049 1226 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 MIR4301-201ENST00000577203 66 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 DHFRP1-201ENST00000579682 559 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AF230666.2-201ENST00000602328 725 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC079880.2-201ENST00000603790 1213 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 RNU6-368P-201ENST00000620928 107 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC095038.2-201ENST00000621464 1070 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 RNU6-538P-201ENST00000622329 107 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC012254.5-201ENST00000623573 478 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL4A3BPQ9Y5P4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 RNA5SP350-201ENST00000363298 111 ntBASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 MT-TP-201ENST00000387461 68 ntBASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 NIFKP3-201ENST00000417799 865 ntBASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 MTCO2P1-201ENST00000424648 477 ntBASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 BX119904.1-201ENST00000432026 348 ntBASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 ARAFP2-201ENST00000440565 559 ntBASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 AC106822.1-201ENST00000502647 526 ntBASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 AC091965.3-201ENST00000506236 208 ntBASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 C1DP5-201ENST00000525775 383 ntBASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 KCTD9P4-201ENST00000526766 1166 ntBASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.22□□□□□ -1.25
COL4A3BPQ9Y5P4 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms