Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SNX18P24-201ENST00000505249 671 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 RNU6-943P-201ENST00000516960 98 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 NF1P12-201ENST00000549593 583 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 LINC00556-201ENST00000569603 412 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC133552.4-201ENST00000576103 676 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 RN7SL131P-201ENST00000579043 256 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC087468.1-201ENST00000604365 630 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 RNU6-84P-201ENST00000607737 102 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC096708.4-201ENST00000620563 552 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 NAMPTP1-201ENST00000440465 2514 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 MAPK10-328ENST00000641553 4009 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 AC083843.2-201ENST00000568248 6253 ntBASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KCNIP3Q9Y2W7 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 MUC2-202ENST00000613187 4845 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC024587.1-201ENST00000505925 2157 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 RN7SKP221-201ENST00000410420 301 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 RNA5SP296-201ENST00000410523 111 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AP003385.1-201ENST00000426387 893 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 OR52S1P-201ENST00000427016 937 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 NFYAP1-201ENST00000431953 972 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 EMC3-AS1-205ENST00000438698 534 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 COL11A2P1-205ENST00000441798 676 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC005165.2-201ENST00000466070 380 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 RN7SL197P-201ENST00000466981 299 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 RN7SL836P-201ENST00000476140 296 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 KHDC1P1-201ENST00000511053 508 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AL133399.1-201ENST00000527476 298 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AL359219.2-201ENST00000555184 348 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC090826.1-203ENST00000569235 490 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 RNU4ATAC-201ENST00000580972 127 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 RPL7AP69-201ENST00000595306 806 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 RPS4XP21-201ENST00000603814 750 ntBASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5□□□□□ -1.61
KCNIP3Q9Y2W7 DDX18P6-201ENST00000450119 1997 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms