Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 LDHAP5-201ENST00000394996 622 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC009506.2-201ENST00000420635 840 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 RPS18P1-201ENST00000447840 458 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 NPM1P9-201ENST00000453156 844 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 RPL31P11-202ENST00000454082 372 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC069277.2-201ENST00000454211 432 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 RN7SL372P-201ENST00000461982 298 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 BOLA3P3-201ENST00000505182 232 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC121161.1-201ENST00000510606 652 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 HMGN1P17-201ENST00000513734 295 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC111000.6-201ENST00000514471 709 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 IGHV1-14-201ENST00000523391 241 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AP005229.2-201ENST00000609980 697 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC004241.3-201ENST00000611728 517 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC009159.2-201ENST00000617603 606 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC138907.10-201ENST00000623708 983 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC126544.2-201ENST00000625174 749 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 CU459211.1-201ENST00000635667 749 ntBASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
AMBRA1Q9C0C7 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC005725.1-201ENST00000577346 2607 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 RN7SKP189-201ENST00000365042 330 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 UBBP1-201ENST00000392399 473 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 ARSFP1-201ENST00000398758 477 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 HYALP1-201ENST00000417674 1279 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 NIFKP3-201ENST00000417799 865 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 ELOCP11-201ENST00000436690 332 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 ELOCP16-201ENST00000444494 332 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AL096829.2-201ENST00000446582 742 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC004890.1-201ENST00000461005 181 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 MTCO2P6-201ENST00000463134 685 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 RPL5P12-201ENST00000477071 851 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC016687.1-201ENST00000482574 353 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 RN7SKP183-201ENST00000517169 324 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 EEF1A1P37-201ENST00000522748 715 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 OR8G5-201ENST00000524943 1041 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 MORF4L1P3-201ENST00000525966 950 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AP002004.1-206ENST00000532441 876 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 OR4A40P-201ENST00000533878 948 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC084824.2-201ENST00000548906 345 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC007494.1-201ENST00000562293 760 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms