Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 TIMM22-201ENST00000327158 3194 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 NF1P9-201ENST00000629326 2008 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 CEP85-202ENST00000451429 4061 ntTSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 NR2E1-201ENST00000368983 2612 ntTSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 ATXN7L3B-201ENST00000519948 7604 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC090987.1-201ENST00000523502 2072 ntTSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 CLDN10-203ENST00000376873 2656 ntTSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 MIS12-206ENST00000611091 2691 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 BRINP2-201ENST00000361539 3558 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 SETD4-201ENST00000332131 3015 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 SKA3-203ENST00000400018 2745 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 SETMAR-201ENST00000358065 2443 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 JAK3-204ENST00000527670 3996 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 KRIT1-205ENST00000412043 3378 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 FCHO1-234ENST00000600676 3094 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 LGR6-201ENST00000255432 3406 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 NET1-201ENST00000355029 3402 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 MAGED1-203ENST00000375722 2806 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AL358933.1-201ENST00000565046 2830 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC068700.1-201ENST00000565862 3754 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC068870.3-201ENST00000625077 2536 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AL080312.1-201ENST00000256654 824 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RN7SKP72-201ENST00000362327 292 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RNU6-961P-201ENST00000363893 105 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RNU4-36P-201ENST00000364294 144 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RNU6-1201P-201ENST00000384227 107 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 MIR9-2-201ENST00000384838 87 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 MIR623-201ENST00000384986 98 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RNU6-644P-201ENST00000391155 98 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AL139039.1-201ENST00000401900 692 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AL121835.1-201ENST00000404250 354 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AL606845.1-201ENST00000404881 255 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RNA5SP41-201ENST00000411020 101 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 EIF4A1P3-201ENST00000411521 244 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RPL15P13-201ENST00000414329 645 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 PPIAP29-201ENST00000414949 499 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC073957.1-201ENST00000418941 535 ntTSL 3 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 SWI5-203ENST00000418976 763 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC073046.1-201ENST00000441217 390 ntTSL 3 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC016696.1-201ENST00000446949 318 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 UBBP5-201ENST00000446970 266 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RPS20P23-201ENST00000461683 354 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RN7SL55P-201ENST00000464534 297 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RN7SL806P-201ENST00000467399 282 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC108114.1-201ENST00000477321 437 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RN7SL625P-201ENST00000488637 291 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 COX6CP6-201ENST00000490840 228 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC131210.1-201ENST00000491347 441 ntTSL 3 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 SSR2-213ENST00000496742 825 ntTSL 3 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC106872.7-201ENST00000508621 312 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 Y_RNA.666-201ENST00000516187 112 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RNU6-1092P-201ENST00000516955 87 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 ERHP1-201ENST00000523006 310 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AP004607.8-201ENST00000526848 323 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 SLC5A4P1-201ENST00000532944 612 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 CACNA1C-AS2-201ENST00000545526 609 ntTSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC055717.2-201ENST00000561864 577 ntTSL 4 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 CYP4A26P-201ENST00000563017 196 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RPL23AP86-201ENST00000573796 541 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 RN7SL712P-201ENST00000579354 308 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC011498.1-201ENST00000591414 478 ntTSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC005176.2-201ENST00000596933 147 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 YPEL5P2-201ENST00000605553 359 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 MIR8076-201ENST00000611401 83 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AL110115.1-201ENST00000614396 364 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 MIR6770-3-201ENST00000616362 60 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 Metazoa_SRP.155-201ENST00000616367 282 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 MIR6770-2-201ENST00000618304 60 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 WT1-AS_1.1-201ENST00000619639 109 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 MIR6770-1-201ENST00000622248 60 ntBASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 KRTAP9-1-203ENST00000634358 330 ntTSL 5 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 AC022167.5-203ENST00000637929 398 ntTSL 5 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 ATP2A1-202ENST00000395503 3536 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 ZNF638-204ENST00000410075 3518 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP4-9Q9BYQ8 PIK3CD-207ENST00000543390 3503 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms