Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SAMM50P1-201ENST00000455403 1399 ntBASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 AC241584.2-201ENST00000637142 2090 ntBASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PTCHD1Q96NR3 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 RNA5SP442-201ENST00000365050 107 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 ATP5F1P3-201ENST00000397213 657 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 SUMO2P13-201ENST00000403109 272 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 RNA5SP280-201ENST00000411230 115 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 MTCO3P41-201ENST00000414801 328 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 RPL7P53-201ENST00000421245 739 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AL593851.1-201ENST00000426171 157 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 MYO5BP3-201ENST00000431872 1279 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 MTCYBP39-201ENST00000437562 491 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 MTCYBP42-201ENST00000444653 1130 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 SDHCP3-201ENST00000445371 506 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AC233982.1-201ENST00000451247 436 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 MRPL42P4-201ENST00000453267 443 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 RN7SL160P-201ENST00000468558 284 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 RPS16P9-201ENST00000477220 427 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 RPL23AP8-201ENST00000479812 475 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 RPL10P7-201ENST00000495649 625 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 OR5H4P-201ENST00000510851 923 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AC096708.2-201ENST00000577676 512 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AP001981.2-201ENST00000603241 418 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AP000811.1-201ENST00000603803 651 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AL078624.2-201ENST00000605063 554 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AC063962.1-201ENST00000608199 521 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 MIR8082-201ENST00000612488 81 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AL031667.3-201ENST00000620124 655 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AL132796.3-201ENST00000624703 900 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 KYNUP2-201ENST00000582280 1329 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 ABCA11P-202ENST00000504019 2110 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 AC132219.2-201ENST00000624416 2327 ntBASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PTCHD1Q96NR3 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.63□□□□□ -1.35
PTCHD1Q96NR3 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms