Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL583832.1-201ENST00000603227 784 ntBASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 AL049840.6-201ENST00000604583 345 ntBASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 HSPD1P8-201ENST00000400121 1658 ntBASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
ECHDC3Q96DC8 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 RNA5SP500-201ENST00000364486 119 ntBASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 AL096800.1-201ENST00000405326 893 ntBASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 HMGN1P20-201ENST00000411849 300 ntBASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 RPS4XP5-201ENST00000419038 768 ntBASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 KCTD9P1-201ENST00000430462 1167 ntBASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 RPS12P17-201ENST00000438591 377 ntBASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 CUBNP2-201ENST00000443534 1139 ntBASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 AL445687.2-201ENST00000458156 728 ntBASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 ACA64.4-201ENST00000459070 127 ntBASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 PPP1R11P1-201ENST00000486095 376 ntBASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 AL662795.2-201ENST00000624252 3706 ntBASIC5.97□□□□□ -1.45
ECHDC3Q96DC8 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
ECHDC3Q96DC8 AL049634.1-201ENST00000453770 1720 ntBASIC5.96□□□□□ -1.45
ECHDC3Q96DC8 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
ECHDC3Q96DC8 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ECHDC3Q96DC8 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ECHDC3Q96DC8 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
ECHDC3Q96DC8 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ECHDC3Q96DC8 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AL451142.1-201ENST00000375867 775 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 SLC20A1P1-201ENST00000413906 956 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AL035660.1-201ENST00000422041 222 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 PCBP2P1-201ENST00000437262 977 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AC084754.1-201ENST00000463466 464 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AC006499.4-201ENST00000510947 694 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 PCNAP4-201ENST00000532690 730 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AC091078.2-201ENST00000557145 559 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 MIR4310-201ENST00000582950 57 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AC027243.2-201ENST00000602530 724 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AC145423.1-201ENST00000605712 336 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 AC130304.1-201ENST00000622942 2385 ntBASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms