Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
NEDD1Q8NHV4 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.18□□□□□ -1.1
NEDD1Q8NHV4 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
NEDD1Q8NHV4 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8.18□□□□□ -1.1
NEDD1Q8NHV4 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.18□□□□□ -1.1
NEDD1Q8NHV4 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.18□□□□□ -1.1
NEDD1Q8NHV4 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NEDD1Q8NHV4 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
NEDD1Q8NHV4 AC095038.1-201ENST00000429248 1591 ntBASIC8.18□□□□□ -1.1
NEDD1Q8NHV4 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NEDD1Q8NHV4 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.18□□□□□ -1.1
NEDD1Q8NHV4 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AC125603.4-201ENST00000621942 2699 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 MRPS17P1-201ENST00000596009 3130 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AC097634.1-201ENST00000604491 2467 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 GMFG-201ENST00000253054 616 ntTSL 5 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 OR4G2P-201ENST00000328113 903 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 RNU6-553P-201ENST00000364047 96 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 RN7SKP232-201ENST00000410170 290 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AL034399.1-201ENST00000451535 380 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 NECAP1P2-201ENST00000455668 727 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AC092691.2-201ENST00000461787 803 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 RN7SL350P-201ENST00000492591 299 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 OR4G11P-201ENST00000492842 939 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 RN7SL143P-201ENST00000496780 297 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 SSX8-201ENST00000506270 579 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AP002963.1-201ENST00000530590 184 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 BGLT3-201ENST00000564523 994 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 ULK4P1-202ENST00000565174 503 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 MIR3915-201ENST00000578518 97 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AC122133.1-201ENST00000613964 233 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 LINC01808-202ENST00000641680 1116 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 UGT2B25P-201ENST00000511504 1586 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AL133243.2-201ENST00000610331 1621 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 AL078595.2-201ENST00000605309 1780 ntBASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NEDD1Q8NHV4 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 OR10D1P-201ENST00000355343 936 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 U3.28-201ENST00000391249 210 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC068138.1-201ENST00000412635 217 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 MTCYBP38-201ENST00000417160 1123 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 MTCO2P34-201ENST00000421994 607 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms