Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 IGHV1-14-201ENST00000523391 241 ntBASIC4.6□□□□□ -1.67
VPS13CQ709C8 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 AC139697.1-201ENST00000548429 745 ntBASIC4.6□□□□□ -1.67
VPS13CQ709C8 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 MAPK10-261ENST00000641050 3109 ntBASIC4.59□□□□□ -1.67
VPS13CQ709C8 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 MIR23A-201ENST00000385245 73 ntBASIC4.59□□□□□ -1.67
VPS13CQ709C8 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 SNORA11C-201ENST00000408532 129 ntBASIC4.59□□□□□ -1.67
VPS13CQ709C8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 RPL7P11-201ENST00000437586 658 ntBASIC4.59□□□□□ -1.67
VPS13CQ709C8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 AC008745.1-201ENST00000604064 271 ntBASIC4.59□□□□□ -1.67
VPS13CQ709C8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 AC013268.3-201ENST00000262716 2324 ntBASIC4.59□□□□□ -1.67
VPS13CQ709C8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 CASC19-205ENST00000641013 1411 ntBASIC4.59□□□□□ -1.67
VPS13CQ709C8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 MYO7B-202ENST00000409816 6694 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 Y_RNA.126-201ENST00000363382 111 ntBASIC4.59□□□□□ -1.67
VPS13CQ709C8 AC068538.1-201ENST00000376856 336 ntBASIC4.59□□□□□ -1.67
VPS13CQ709C8 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 TPT1P13-201ENST00000449760 499 ntBASIC4.59□□□□□ -1.67
VPS13CQ709C8 OR7A15P-201ENST00000449848 1009 ntBASIC4.59□□□□□ -1.67
VPS13CQ709C8 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 AC024589.2-201ENST00000605642 1294 ntBASIC4.59□□□□□ -1.67
VPS13CQ709C8 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS13CQ709C8 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS13CQ709C8 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
VPS13CQ709C8 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
VPS13CQ709C8 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
VPS13CQ709C8 NCAM1-229ENST00000621518 4922 ntTSL 5 BASIC4.59□□□□□ -1.68
VPS13CQ709C8 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
VPS13CQ709C8 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.59□□□□□ -1.68
VPS13CQ709C8 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.59□□□□□ -1.68
VPS13CQ709C8 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.59□□□□□ -1.68
VPS13CQ709C8 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.59□□□□□ -1.68
VPS13CQ709C8 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.59□□□□□ -1.68
VPS13CQ709C8 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.59□□□□□ -1.68
VPS13CQ709C8 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.59□□□□□ -1.68
VPS13CQ709C8 BGLT3-201ENST00000564523 994 ntBASIC4.59□□□□□ -1.68
VPS13CQ709C8 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.59□□□□□ -1.68
VPS13CQ709C8 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.59□□□□□ -1.68
VPS13CQ709C8 OR52H1-202ENST00000641796 1061 ntBASIC4.59□□□□□ -1.68
VPS13CQ709C8 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
VPS13CQ709C8 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
VPS13CQ709C8 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
VPS13CQ709C8 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
VPS13CQ709C8 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
VPS13CQ709C8 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
VPS13CQ709C8 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS13CQ709C8 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS13CQ709C8 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS13CQ709C8 AC010132.2-201ENST00000295493 1043 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 AL133482.1-201ENST00000415988 498 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 AC092106.1-201ENST00000444291 373 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 OR7H2P-201ENST00000513483 306 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 DPPA3P2-202ENST00000557188 1219 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 MIR4260-201ENST00000583107 67 ntBASIC4.58□□□□□ -1.68
VPS13CQ709C8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS13CQ709C8 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms