Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 RNU1-65P-201ENST00000363919 148 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 SNORA43.1-201ENST00000364863 140 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 SNORA7A-201ENST00000384765 139 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 RN7SKP281-201ENST00000410472 352 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 RN7SKP279-201ENST00000411383 298 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 NMD3P2-201ENST00000421815 761 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 RPL23AP60-201ENST00000450011 454 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 RPL23AP40-201ENST00000487630 390 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AC078899.1-201ENST00000521432 1185 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AC009852.2-201ENST00000567898 485 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 MIR378C-201ENST00000578683 81 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 MIR3157-201ENST00000578688 85 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 RNU4ATAC-201ENST00000580972 127 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 DYNLL1P1-201ENST00000595442 269 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AL049840.6-201ENST00000604583 345 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AL499605.1-201ENST00000604628 403 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AL133481.2-203ENST00000607558 139 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AL683826.1-201ENST00000624104 627 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 AC073593.1-201ENST00000624500 411 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 SNX18P12-201ENST00000624821 759 ntBASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC173Q0VFZ6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 OR9K1P-202ENST00000641111 3217 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 RN7SKP189-201ENST00000365042 330 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 RNA5SP176-201ENST00000390956 110 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 AL358178.1-201ENST00000407698 397 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 RN7SKP166-201ENST00000410812 305 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 GPS2P1-201ENST00000411761 986 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 AC079807.1-201ENST00000429993 481 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 KCTD9P1-201ENST00000430462 1167 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 MORF4-201ENST00000447135 971 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 GAPDHP14-201ENST00000450472 937 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 AC104339.1-201ENST00000465478 348 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 RN7SL70P-201ENST00000478322 302 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 AC010442.1-201ENST00000515583 816 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 RN7SKP288-201ENST00000516227 268 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 AL163952.1-202ENST00000569625 600 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 MIR4732-201ENST00000581873 76 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 SNORD96A-201ENST00000606577 79 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 AL137000.1-201ENST00000610528 1244 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 MIR6071-201ENST00000616741 78 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 AP000550.3-201ENST00000637734 379 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 AC003985.2-201ENST00000562268 1669 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 AC125336.1-201ENST00000508893 2827 ntBASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CCDC173Q0VFZ6 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CCDC173Q0VFZ6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC173Q0VFZ6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC173Q0VFZ6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CCDC173Q0VFZ6 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC173Q0VFZ6 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC173Q0VFZ6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CCDC173Q0VFZ6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC173Q0VFZ6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC173Q0VFZ6 RPL11P3-201ENST00000395256 523 ntBASIC6.79□□□□□ -1.32
CCDC173Q0VFZ6 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC173Q0VFZ6 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.79□□□□□ -1.32
CCDC173Q0VFZ6 NPM1P23-201ENST00000440193 849 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms