Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.37□□□□□ -1.55
H3F3AP84243 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.37□□□□□ -1.55
H3F3AP84243 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.37□□□□□ -1.55
H3F3AP84243 AL136131.3-201ENST00000607600 188 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 MIR6809-201ENST00000612189 116 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 AL355974.3-201ENST00000617383 467 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 AL136228.1-201ENST00000622221 319 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
H3F3AP84243 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.37□□□□□ -1.55
H3F3AP84243 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 PSG10P-201ENST00000501199 1500 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.37□□□□□ -1.55
H3F3AP84243 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
H3F3AP84243 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 AC015799.1-201ENST00000622996 3122 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 AC012254.3-201ENST00000591183 2117 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
H3F3AP84243 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 AC232271.1-201ENST00000602455 2715 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.36□□□□□ -1.55
H3F3AP84243 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3AP84243 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3AP84243 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3AP84243 AC107977.1-201ENST00000355745 939 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 RNU1-59P-201ENST00000364829 162 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
H3F3AP84243 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.36□□□□□ -1.55
H3F3AP84243 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.36□□□□□ -1.55
H3F3AP84243 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.36□□□□□ -1.55
H3F3AP84243 CUBNP2-201ENST00000443534 1139 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3AP84243 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.36□□□□□ -1.55
H3F3AP84243 AC104164.1-201ENST00000460282 590 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 AC068228.1-201ENST00000461723 211 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 AC124945.1-201ENST00000485133 188 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.36□□□□□ -1.55
H3F3AP84243 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.36□□□□□ -1.55
H3F3AP84243 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.36□□□□□ -1.55
H3F3AP84243 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3AP84243 OR7E158P-201ENST00000524483 910 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.36□□□□□ -1.55
H3F3AP84243 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.36□□□□□ -1.55
H3F3AP84243 CYCSP38-201ENST00000559840 322 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.36□□□□□ -1.55
H3F3AP84243 LINC00556-201ENST00000569603 412 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 MIR132-201ENST00000591554 101 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 AL136097.3-201ENST00000611097 505 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 U1.25-201ENST00000614085 162 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 U1.34-201ENST00000618578 162 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 AC245014.3-201ENST00000618589 347 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 U1.31-201ENST00000620022 160 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.36□□□□□ -1.55
H3F3AP84243 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3AP84243 WDR95P-201ENST00000425638 1542 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 LYARP1-201ENST00000436977 1501 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3AP84243 BX284613.1-201ENST00000452221 1641 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3AP84243 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3AP84243 AC005725.1-201ENST00000577346 2607 ntBASIC5.36□□□□□ -1.55
H3F3AP84243 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3AP84243 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3AP84243 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3AP84243 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.35□□□□□ -1.55
H3F3AP84243 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
H3F3AP84243 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 THAP12P9-201ENST00000503971 2360 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3AP84243 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3AP84243 CASC19-238ENST00000641523 1558 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 CAP1P2-201ENST00000417455 1409 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
H3F3AP84243 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
H3F3AP84243 RNFT1P3-201ENST00000340898 1052 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.35□□□□□ -1.55
H3F3AP84243 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 1075.1 ms