Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
MSH6P52701 CR383656.6-201ENST00000550518 394 ntBASIC8.25□□□□□ -1.09
MSH6P52701 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.25□□□□□ -1.09
MSH6P52701 RNU4ATAC-201ENST00000580972 127 ntBASIC8.25□□□□□ -1.09
MSH6P52701 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
MSH6P52701 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC8.25□□□□□ -1.09
MSH6P52701 SRRM1P3-201ENST00000426911 2678 ntBASIC8.25□□□□□ -1.09
MSH6P52701 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
MSH6P52701 AC022819.1-201ENST00000563495 3910 ntBASIC8.25□□□□□ -1.09
MSH6P52701 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
MSH6P52701 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
MSH6P52701 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
MSH6P52701 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
MSH6P52701 AP000866.6-201ENST00000638898 3579 ntBASIC8.25□□□□□ -1.09
MSH6P52701 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
MSH6P52701 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
MSH6P52701 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.25□□□□□ -1.09
MSH6P52701 AC114786.1-201ENST00000512892 1415 ntBASIC8.25□□□□□ -1.09
MSH6P52701 AC105235.1-201ENST00000623208 1816 ntBASIC8.25□□□□□ -1.09
MSH6P52701 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.25□□□□□ -1.09
MSH6P52701 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
MSH6P52701 TEK-202ENST00000406359 3935 ntTSL 2 BASIC8.24□□□□□ -1.09
MSH6P52701 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC8.24□□□□□ -1.09
MSH6P52701 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
MSH6P52701 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC8.24□□□□□ -1.09
MSH6P52701 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC8.24□□□□□ -1.09
MSH6P52701 AC092967.1-201ENST00000449016 481 ntBASIC8.24□□□□□ -1.09
MSH6P52701 FAR2P1-206ENST00000449736 709 ntBASIC8.24□□□□□ -1.09
MSH6P52701 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
MSH6P52701 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC8.24□□□□□ -1.09
MSH6P52701 AC072052.1-201ENST00000496556 306 ntBASIC8.24□□□□□ -1.09
MSH6P52701 OR51K1P-201ENST00000510214 950 ntBASIC8.24□□□□□ -1.09
MSH6P52701 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.24□□□□□ -1.09
MSH6P52701 AP000676.2-201ENST00000529711 301 ntBASIC8.24□□□□□ -1.09
MSH6P52701 MIR4436B2-201ENST00000581415 91 ntBASIC8.24□□□□□ -1.09
MSH6P52701 MIR4436B1-201ENST00000583272 91 ntBASIC8.24□□□□□ -1.09
MSH6P52701 AC010245.2-201ENST00000606908 1167 ntBASIC8.24□□□□□ -1.09
MSH6P52701 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
MSH6P52701 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC8.24□□□□□ -1.09
MSH6P52701 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
MSH6P52701 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.24□□□□□ -1.09
MSH6P52701 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
MSH6P52701 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
MSH6P52701 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
MSH6P52701 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
MSH6P52701 AC131971.1-201ENST00000332881 1482 ntBASIC8.24□□□□□ -1.09
MSH6P52701 AL662795.2-201ENST00000624252 3706 ntBASIC8.24□□□□□ -1.09
MSH6P52701 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
MSH6P52701 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
MSH6P52701 AC112243.1-201ENST00000623949 3851 ntBASIC8.24□□□□□ -1.09
MSH6P52701 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
MSH6P52701 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
MSH6P52701 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.24□□□□□ -1.09
MSH6P52701 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
MSH6P52701 CD86-204ENST00000469710 1604 ntTSL 2 BASIC8.24□□□□□ -1.09
MSH6P52701 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
MSH6P52701 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
MSH6P52701 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
MSH6P52701 AL589647.1-201ENST00000402485 466 ntBASIC8.23□□□□□ -1.09
MSH6P52701 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC8.23□□□□□ -1.09
MSH6P52701 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC8.23□□□□□ -1.09
MSH6P52701 FRG2FP-204ENST00000453982 852 ntBASIC8.23□□□□□ -1.09
MSH6P52701 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC8.23□□□□□ -1.09
MSH6P52701 AL049779.2-201ENST00000553847 315 ntBASIC8.23□□□□□ -1.09
MSH6P52701 RBM22P12-201ENST00000567098 1255 ntBASIC8.23□□□□□ -1.09
MSH6P52701 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.23□□□□□ -1.09
MSH6P52701 AL139099.4-201ENST00000614802 114 ntBASIC8.23□□□□□ -1.09
MSH6P52701 AL731566.2-201ENST00000618971 317 ntBASIC8.23□□□□□ -1.09
MSH6P52701 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC8.23□□□□□ -1.09
MSH6P52701 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
MSH6P52701 AC007938.2-201ENST00000604666 2634 ntBASIC8.23□□□□□ -1.09
MSH6P52701 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
MSH6P52701 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
MSH6P52701 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
MSH6P52701 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC8.23□□□□□ -1.09
MSH6P52701 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
MSH6P52701 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
MSH6P52701 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
MSH6P52701 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
MSH6P52701 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC8.23□□□□□ -1.09
MSH6P52701 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
MSH6P52701 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
MSH6P52701 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.23□□□□□ -1.09
MSH6P52701 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC8.22□□□□□ -1.09
MSH6P52701 TPT1-204ENST00000379060 764 ntTSL 5 BASIC8.22□□□□□ -1.09
MSH6P52701 MIR765-201ENST00000390226 114 ntBASIC8.22□□□□□ -1.09
MSH6P52701 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.22□□□□□ -1.09
MSH6P52701 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC8.22□□□□□ -1.09
MSH6P52701 CYCSP12-201ENST00000437729 300 ntBASIC8.22□□□□□ -1.09
MSH6P52701 AC011742.2-201ENST00000443818 352 ntBASIC8.22□□□□□ -1.09
MSH6P52701 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC8.22□□□□□ -1.09
MSH6P52701 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC8.22□□□□□ -1.09
MSH6P52701 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC8.22□□□□□ -1.09
MSH6P52701 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC8.22□□□□□ -1.09
MSH6P52701 HNRNPCP1-201ENST00000556181 766 ntBASIC8.22□□□□□ -1.09
MSH6P52701 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.22□□□□□ -1.09
MSH6P52701 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC8.22□□□□□ -1.09
MSH6P52701 AC100827.5-201ENST00000615883 426 ntBASIC8.22□□□□□ -1.09
MSH6P52701 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
MSH6P52701 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms