Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.41□□□□□ -1.38
RFC1P35251 SNORD116-30-201ENST00000516468 85 ntBASIC6.41□□□□□ -1.38
RFC1P35251 RNA5SP441-201ENST00000516809 88 ntBASIC6.41□□□□□ -1.38
RFC1P35251 RN7SKP5-201ENST00000517045 272 ntBASIC6.41□□□□□ -1.38
RFC1P35251 AC008429.4-201ENST00000521201 182 ntBASIC6.41□□□□□ -1.38
RFC1P35251 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.41□□□□□ -1.38
RFC1P35251 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.41□□□□□ -1.38
RFC1P35251 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.41□□□□□ -1.38
RFC1P35251 AC121758.1-202ENST00000556917 658 ntBASIC6.41□□□□□ -1.38
RFC1P35251 MIR4701-201ENST00000583094 63 ntBASIC6.41□□□□□ -1.38
RFC1P35251 GLYATL1P2-202ENST00000588046 902 ntBASIC6.41□□□□□ -1.38
RFC1P35251 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.41□□□□□ -1.38
RFC1P35251 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.41□□□□□ -1.38
RFC1P35251 SMIM12P1-201ENST00000603004 274 ntBASIC6.41□□□□□ -1.38
RFC1P35251 AL023583.1-201ENST00000607518 1143 ntBASIC6.41□□□□□ -1.38
RFC1P35251 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
RFC1P35251 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFC1P35251 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFC1P35251 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFC1P35251 AC093297.3-201ENST00000607056 2517 ntBASIC6.41□□□□□ -1.38
RFC1P35251 CASC19-255ENST00000641733 1385 ntBASIC6.41□□□□□ -1.38
RFC1P35251 AL731532.1-201ENST00000623972 4236 ntBASIC6.41□□□□□ -1.38
RFC1P35251 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.41□□□□□ -1.38
RFC1P35251 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFC1P35251 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFC1P35251 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.4□□□□□ -1.38
RFC1P35251 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RFC1P35251 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFC1P35251 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFC1P35251 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFC1P35251 AC005005.4-201ENST00000623789 16698 ntBASIC6.4□□□□□ -1.38
RFC1P35251 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFC1P35251 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
RFC1P35251 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFC1P35251 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.4□□□□□ -1.38
RFC1P35251 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RFC1P35251 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.4□□□□□ -1.38
RFC1P35251 AL096829.1-201ENST00000413677 457 ntBASIC6.4□□□□□ -1.38
RFC1P35251 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.4□□□□□ -1.38
RFC1P35251 IGLV3-4-201ENST00000432300 244 ntBASIC6.4□□□□□ -1.38
RFC1P35251 LDHAP2-201ENST00000437325 985 ntBASIC6.4□□□□□ -1.38
RFC1P35251 AC010240.2-201ENST00000445363 1205 ntBASIC6.4□□□□□ -1.38
RFC1P35251 AL445687.2-201ENST00000458156 728 ntBASIC6.4□□□□□ -1.38
RFC1P35251 RN7SL352P-201ENST00000466002 277 ntBASIC6.4□□□□□ -1.38
RFC1P35251 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.4□□□□□ -1.38
RFC1P35251 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.4□□□□□ -1.38
RFC1P35251 RN7SL362P-201ENST00000494228 267 ntBASIC6.4□□□□□ -1.38
RFC1P35251 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.4□□□□□ -1.38
RFC1P35251 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.4□□□□□ -1.38
RFC1P35251 AC112484.3-201ENST00000505910 329 ntBASIC6.4□□□□□ -1.38
RFC1P35251 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.4□□□□□ -1.38
RFC1P35251 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.4□□□□□ -1.38
RFC1P35251 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RFC1P35251 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.4□□□□□ -1.38
RFC1P35251 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFC1P35251 AC067805.1-201ENST00000559344 470 ntBASIC6.4□□□□□ -1.38
RFC1P35251 OR1E3-201ENST00000575608 948 ntBASIC6.4□□□□□ -1.38
RFC1P35251 AC245128.3-201ENST00000594721 748 ntBASIC6.4□□□□□ -1.38
RFC1P35251 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.4□□□□□ -1.38
RFC1P35251 AL109620.1-201ENST00000618738 1197 ntBASIC6.4□□□□□ -1.38
RFC1P35251 AC048341.3-201ENST00000619323 491 ntBASIC6.4□□□□□ -1.38
RFC1P35251 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.4□□□□□ -1.38
RFC1P35251 AC073488.6-201ENST00000632293 754 ntBASIC6.4□□□□□ -1.38
RFC1P35251 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFC1P35251 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFC1P35251 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
RFC1P35251 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RFC1P35251 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RFC1P35251 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
RFC1P35251 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.4□□□□□ -1.39
RFC1P35251 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RFC1P35251 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.4□□□□□ -1.39
RFC1P35251 AC027279.1-201ENST00000568885 4284 ntBASIC6.4□□□□□ -1.39
RFC1P35251 AC027279.4-201ENST00000624371 2072 ntBASIC6.4□□□□□ -1.39
RFC1P35251 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RFC1P35251 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RFC1P35251 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
RFC1P35251 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
RFC1P35251 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC1P35251 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC1P35251 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC1P35251 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC1P35251 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.39□□□□□ -1.39
RFC1P35251 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC1P35251 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC1P35251 SNORA21-201ENST00000362423 132 ntBASIC6.39□□□□□ -1.39
RFC1P35251 RNU105B-201ENST00000364478 208 ntBASIC6.39□□□□□ -1.39
RFC1P35251 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC1P35251 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC1P35251 RNA5SP156-201ENST00000410250 110 ntBASIC6.39□□□□□ -1.39
RFC1P35251 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.39□□□□□ -1.39
RFC1P35251 RPS15AP30-201ENST00000420976 390 ntBASIC6.39□□□□□ -1.39
RFC1P35251 RPL7AP14-201ENST00000424041 802 ntBASIC6.39□□□□□ -1.39
RFC1P35251 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.39□□□□□ -1.39
RFC1P35251 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.39□□□□□ -1.39
RFC1P35251 AC108479.1-201ENST00000431142 427 ntBASIC6.39□□□□□ -1.39
RFC1P35251 AL731534.1-201ENST00000434711 269 ntBASIC6.39□□□□□ -1.39
RFC1P35251 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.39□□□□□ -1.39
RFC1P35251 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.39□□□□□ -1.39
RFC1P35251 CCNHP1-201ENST00000513311 678 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms