Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC10.01□□□□□ -0.81
TOP2AP11388 ASB8-202ENST00000535055 657 ntTSL 2 BASIC10.01□□□□□ -0.81
TOP2AP11388 OR11J2P-201ENST00000555298 907 ntBASIC10.01□□□□□ -0.81
TOP2AP11388 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC10.01□□□□□ -0.81
TOP2AP11388 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC10.01□□□□□ -0.81
TOP2AP11388 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TOP2AP11388 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TOP2AP11388 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
TOP2AP11388 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TOP2AP11388 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
TOP2AP11388 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC10.01□□□□□ -0.81
TOP2AP11388 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
TOP2AP11388 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TOP2AP11388 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC10□□□□□ -0.81
TOP2AP11388 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC10□□□□□ -0.81
TOP2AP11388 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
TOP2AP11388 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC10□□□□□ -0.81
TOP2AP11388 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TOP2AP11388 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC10□□□□□ -0.81
TOP2AP11388 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
TOP2AP11388 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC10□□□□□ -0.81
TOP2AP11388 H2AFZP6-201ENST00000444403 394 ntBASIC10□□□□□ -0.81
TOP2AP11388 CT45A11P-201ENST00000448043 1134 ntBASIC10□□□□□ -0.81
TOP2AP11388 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC10□□□□□ -0.81
TOP2AP11388 RPS23P1-201ENST00000491662 432 ntBASIC10□□□□□ -0.81
TOP2AP11388 AC072052.1-201ENST00000496556 306 ntBASIC10□□□□□ -0.81
TOP2AP11388 AC110775.1-201ENST00000513721 462 ntBASIC10□□□□□ -0.81
TOP2AP11388 SNORA26.10-201ENST00000516427 141 ntBASIC10□□□□□ -0.81
TOP2AP11388 EIF4A2P5-201ENST00000529914 499 ntBASIC10□□□□□ -0.81
TOP2AP11388 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC10□□□□□ -0.81
TOP2AP11388 CASC22-201ENST00000569713 386 ntTSL 5 BASIC10□□□□□ -0.81
TOP2AP11388 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC10□□□□□ -0.81
TOP2AP11388 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
TOP2AP11388 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC10□□□□□ -0.81
TOP2AP11388 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC10□□□□□ -0.81
TOP2AP11388 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC10□□□□□ -0.81
TOP2AP11388 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
TOP2AP11388 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TOP2AP11388 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC10□□□□□ -0.81
TOP2AP11388 AC018809.2-201ENST00000602436 3823 ntBASIC9.99□□□□□ -0.81
TOP2AP11388 AC023421.1-201ENST00000590535 1785 ntBASIC9.99□□□□□ -0.81
TOP2AP11388 EEF1A1P14-201ENST00000421195 1376 ntBASIC9.99□□□□□ -0.81
TOP2AP11388 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TOP2AP11388 PARN-201ENST00000341484 2100 ntTSL 2 BASIC9.99□□□□□ -0.81
TOP2AP11388 MFSD8-239ENST00000641590 2479 ntBASIC9.99□□□□□ -0.81
TOP2AP11388 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC9.99□□□□□ -0.81
TOP2AP11388 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TOP2AP11388 SNORD8-201ENST00000363915 110 ntBASIC9.99□□□□□ -0.81
TOP2AP11388 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TOP2AP11388 RN7SKP213-201ENST00000410746 298 ntBASIC9.99□□□□□ -0.81
TOP2AP11388 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC9.99□□□□□ -0.81
TOP2AP11388 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC9.99□□□□□ -0.81
TOP2AP11388 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC9.99□□□□□ -0.81
TOP2AP11388 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC9.99□□□□□ -0.81
TOP2AP11388 MIR2117-201ENST00000516780 80 ntBASIC9.99□□□□□ -0.81
TOP2AP11388 AP000676.2-201ENST00000529711 301 ntBASIC9.99□□□□□ -0.81
TOP2AP11388 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC9.99□□□□□ -0.81
TOP2AP11388 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC9.99□□□□□ -0.81
TOP2AP11388 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC9.99□□□□□ -0.81
TOP2AP11388 SETP3-201ENST00000581726 813 ntBASIC9.99□□□□□ -0.81
TOP2AP11388 AL137246.2-201ENST00000613439 662 ntBASIC9.99□□□□□ -0.81
TOP2AP11388 AC090527.3-201ENST00000619041 548 ntBASIC9.99□□□□□ -0.81
TOP2AP11388 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
TOP2AP11388 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TOP2AP11388 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TOP2AP11388 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
TOP2AP11388 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
TOP2AP11388 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
TOP2AP11388 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
TOP2AP11388 AC006058.1-201ENST00000568686 5067 ntBASIC9.99□□□□□ -0.81
TOP2AP11388 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC9.98□□□□□ -0.81
TOP2AP11388 DOCK11P1-201ENST00000553480 5932 ntBASIC9.98□□□□□ -0.81
TOP2AP11388 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
TOP2AP11388 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
TOP2AP11388 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TOP2AP11388 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC9.98□□□□□ -0.81
TOP2AP11388 AK3P5-201ENST00000432033 519 ntBASIC9.98□□□□□ -0.81
TOP2AP11388 RPL7P6-201ENST00000480903 738 ntBASIC9.98□□□□□ -0.81
TOP2AP11388 RPL15P21-201ENST00000495592 567 ntBASIC9.98□□□□□ -0.81
TOP2AP11388 AC022832.1-201ENST00000530718 645 ntBASIC9.98□□□□□ -0.81
TOP2AP11388 AC139697.1-201ENST00000548429 745 ntBASIC9.98□□□□□ -0.81
TOP2AP11388 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC9.98□□□□□ -0.81
TOP2AP11388 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC9.98□□□□□ -0.81
TOP2AP11388 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
TOP2AP11388 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC9.98□□□□□ -0.81
TOP2AP11388 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC9.98□□□□□ -0.81
TOP2AP11388 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TOP2AP11388 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
TOP2AP11388 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TOP2AP11388 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
TOP2AP11388 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
TOP2AP11388 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC9.98□□□□□ -0.81
TOP2AP11388 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
TOP2AP11388 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC9.98□□□□□ -0.81
TOP2AP11388 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOP2AP11388 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC9.97□□□□□ -0.81
TOP2AP11388 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC9.97□□□□□ -0.81
TOP2AP11388 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC9.97□□□□□ -0.81
TOP2AP11388 RPL7P45-201ENST00000455851 743 ntBASIC9.97□□□□□ -0.81
TOP2AP11388 BLZF2P-201ENST00000553776 1130 ntBASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms