Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RPL7AP23-201ENST00000482625 776 ntBASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 RN7SL187P-201ENST00000495587 303 ntBASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 UGT2A3P7-201ENST00000510485 734 ntBASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 CETN3-206ENST00000522864 738 ntTSL 3 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AC135983.3-201ENST00000528049 1226 ntBASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AC023827.2-201ENST00000566880 1061 ntBASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 ANP32BP1-202ENST00000568553 737 ntBASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AL078601.3-201ENST00000573303 535 ntBASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 RN7SL753P-201ENST00000581238 290 ntBASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AL031775.1-201ENST00000607014 887 ntBASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AC022400.9-201ENST00000623633 273 ntBASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AC003992.1-201ENST00000635364 557 ntBASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC9.05□□□□□ -0.96
CSB-PGBD3P0DP91 TMCC1P1-201ENST00000518897 1980 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC025040.2-201ENST00000558657 1852 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 RNU6-304P-201ENST00000364855 107 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 HSPD1P16-201ENST00000402302 394 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AL445183.3-201ENST00000414168 502 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 MRPS21P5-201ENST00000417885 231 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 OSTCP5-201ENST00000425293 453 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 NAP1L4P2-201ENST00000425958 899 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AL365396.1-201ENST00000430854 671 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 OR10R1P-201ENST00000441524 1141 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 OR2L9P-201ENST00000444456 913 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 RN7SL552P-201ENST00000462094 276 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC091874.2-201ENST00000505889 720 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 MTCYBP41-201ENST00000528913 1123 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AP000916.1-201ENST00000533869 835 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC084824.1-201ENST00000550917 1005 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC009955.2-201ENST00000597288 542 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AL513548.2-201ENST00000602994 1207 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC114477.1-201ENST00000605097 605 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC073137.1-201ENST00000605636 634 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AL513477.2-201ENST00000607858 568 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC109347.2-201ENST00000610220 349 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC015922.4-201ENST00000612568 690 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 MIR7854-201ENST00000620068 65 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC092159.4-201ENST00000624944 550 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 SNORA16A-202ENST00000628458 135 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC119674.1-201ENST00000641611 1210 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms