Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC096921.2-201ENST00000561507 1916 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC027088.4-201ENST00000611559 1947 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-DOAP06340 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-DOAP06340 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-DOAP06340 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 SNRPEP6-201ENST00000407465 277 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 RN7SKP161-201ENST00000411110 305 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 EEF1B2P8-201ENST00000414101 671 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 CDY17P-201ENST00000414121 1282 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 FABP5P2-201ENST00000439042 408 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 AP006222.1-205ENST00000450734 457 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 RPS27AP3-201ENST00000453803 454 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC023245.1-201ENST00000468501 517 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-DOAP06340 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 MTND1P8-201ENST00000571424 950 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC067852.5-201ENST00000589299 310 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC020916.2-201ENST00000591242 360 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 COX6CP7-201ENST00000597056 208 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC091193.1-201ENST00000604640 448 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC138473.1-201ENST00000605717 526 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC127024.6-201ENST00000621598 424 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-DOAP06340 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-DOAP06340 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC092724.1-201ENST00000624623 3397 ntBASIC7.17□□□□□ -1.26
HLA-DOAP06340 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-DOAP06340 AC092692.1-201ENST00000623625 2595 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-DOAP06340 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-DOAP06340 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 OR10R3P-201ENST00000361688 942 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 RN7SKP81-201ENST00000365603 331 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 AL354890.1-201ENST00000413730 346 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 RPL35AP3-201ENST00000414680 288 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-DOAP06340 SFR1P2-201ENST00000421841 730 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-DOAP06340 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 MTND1P26-201ENST00000440488 538 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 RPL23AP60-201ENST00000450011 454 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 AC103563.5-201ENST00000455643 364 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 RN7SL269P-201ENST00000467795 305 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-DOAP06340 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 AC110056.1-201ENST00000525759 911 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 AP000648.1-201ENST00000529682 397 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 AP000919.1-201ENST00000582850 985 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 AC011445.2-201ENST00000599274 173 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 AL031601.1-201ENST00000605702 394 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 AC110792.4-201ENST00000609843 298 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.16□□□□□ -1.26
HLA-DOAP06340 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-DOAP06340 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
HLA-DOAP06340 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HLA-DOAP06340 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms