Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.32□□□□□ -1.4
APOEP02649 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
APOEP02649 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.32□□□□□ -1.4
APOEP02649 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.32□□□□□ -1.4
APOEP02649 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.32□□□□□ -1.4
APOEP02649 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
APOEP02649 CASC19-238ENST00000641523 1558 ntBASIC6.31□□□□□ -1.4
APOEP02649 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
APOEP02649 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.31□□□□□ -1.4
APOEP02649 OR7E156P-201ENST00000400303 464 ntBASIC6.31□□□□□ -1.4
APOEP02649 SNORA77.2-201ENST00000408571 112 ntBASIC6.31□□□□□ -1.4
APOEP02649 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.31□□□□□ -1.4
APOEP02649 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.31□□□□□ -1.4
APOEP02649 ATP5LP2-201ENST00000440646 311 ntBASIC6.31□□□□□ -1.4
APOEP02649 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
APOEP02649 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.31□□□□□ -1.4
APOEP02649 AC092865.4-201ENST00000477936 615 ntBASIC6.31□□□□□ -1.4
APOEP02649 AC083795.1-201ENST00000491760 320 ntBASIC6.31□□□□□ -1.4
APOEP02649 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.31□□□□□ -1.4
APOEP02649 LSM3P4-201ENST00000502948 309 ntBASIC6.31□□□□□ -1.4
APOEP02649 LDHAP1-201ENST00000509421 992 ntBASIC6.31□□□□□ -1.4
APOEP02649 RN7SKP238-201ENST00000516483 249 ntBASIC6.31□□□□□ -1.4
APOEP02649 IGKV2-19-201ENST00000518132 283 ntBASIC6.31□□□□□ -1.4
APOEP02649 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
APOEP02649 HMGN2P47-201ENST00000559378 272 ntBASIC6.31□□□□□ -1.4
APOEP02649 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.31□□□□□ -1.4
APOEP02649 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.31□□□□□ -1.4
APOEP02649 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.31□□□□□ -1.4
APOEP02649 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
APOEP02649 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.31□□□□□ -1.4
APOEP02649 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.31□□□□□ -1.4
APOEP02649 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
APOEP02649 AP000550.3-201ENST00000637734 379 ntBASIC6.31□□□□□ -1.4
APOEP02649 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.31□□□□□ -1.4
APOEP02649 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.31□□□□□ -1.4
APOEP02649 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
APOEP02649 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
APOEP02649 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.31□□□□□ -1.4
APOEP02649 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
APOEP02649 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
APOEP02649 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
APOEP02649 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
APOEP02649 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.3□□□□□ -1.4
APOEP02649 AC004386.1-201ENST00000393214 761 ntBASIC6.3□□□□□ -1.4
APOEP02649 AKR1B10P1-201ENST00000425765 942 ntBASIC6.3□□□□□ -1.4
APOEP02649 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.3□□□□□ -1.4
APOEP02649 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
APOEP02649 AC110602.1-201ENST00000437414 318 ntBASIC6.3□□□□□ -1.4
APOEP02649 BX679664.2-201ENST00000439282 283 ntBASIC6.3□□□□□ -1.4
APOEP02649 AL512593.1-201ENST00000444758 779 ntBASIC6.3□□□□□ -1.4
APOEP02649 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.3□□□□□ -1.4
APOEP02649 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.3□□□□□ -1.4
APOEP02649 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.3□□□□□ -1.4
APOEP02649 CYP4F27P-201ENST00000514557 494 ntBASIC6.3□□□□□ -1.4
APOEP02649 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.3□□□□□ -1.4
APOEP02649 RPA2P1-201ENST00000556557 721 ntBASIC6.3□□□□□ -1.4
APOEP02649 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.3□□□□□ -1.4
APOEP02649 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.3□□□□□ -1.4
APOEP02649 AC096861.1-201ENST00000616652 240 ntBASIC6.3□□□□□ -1.4
APOEP02649 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.3□□□□□ -1.4
APOEP02649 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.3□□□□□ -1.4
APOEP02649 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 AC015799.1-201ENST00000622996 3122 ntBASIC6.3□□□□□ -1.4
APOEP02649 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
APOEP02649 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
APOEP02649 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.3□□□□□ -1.4
APOEP02649 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.3□□□□□ -1.4
APOEP02649 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
APOEP02649 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
APOEP02649 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
APOEP02649 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
APOEP02649 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
APOEP02649 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
APOEP02649 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
APOEP02649 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
APOEP02649 OR10R3P-201ENST00000361688 942 ntBASIC6.29□□□□□ -1.4
APOEP02649 GNG5P2-201ENST00000372054 207 ntBASIC6.29□□□□□ -1.4
APOEP02649 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
APOEP02649 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
APOEP02649 U3.23-201ENST00000391132 200 ntBASIC6.29□□□□□ -1.4
APOEP02649 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
APOEP02649 RN7SKP240-201ENST00000410583 375 ntBASIC6.29□□□□□ -1.4
APOEP02649 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.29□□□□□ -1.4
APOEP02649 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.29□□□□□ -1.4
APOEP02649 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.29□□□□□ -1.4
APOEP02649 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms