Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFBP01127 AC012254.3-201ENST00000591183 2117 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.16□□□□□ -1.42
PDGFBP01127 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFBP01127 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFBP01127 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFBP01127 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PDGFBP01127 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PDGFBP01127 SNRPEP6-201ENST00000407465 277 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 CYCSP52-201ENST00000422857 310 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 AL139148.1-201ENST00000427122 680 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFBP01127 Z84478.1-201ENST00000438230 1219 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 AL390119.1-201ENST00000440329 312 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 DEFA11P-201ENST00000446470 261 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFBP01127 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFBP01127 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.16□□□□□ -1.42
PDGFBP01127 RN7SL547P-201ENST00000490793 290 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDGFBP01127 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFBP01127 NENFP3-201ENST00000503735 313 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 AC091965.3-201ENST00000506236 208 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 NPM1P21-201ENST00000513394 762 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 OR8G3P-201ENST00000533406 921 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.16□□□□□ -1.42
PDGFBP01127 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFBP01127 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFBP01127 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PDGFBP01127 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFBP01127 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFBP01127 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFBP01127 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFBP01127 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.16□□□□□ -1.42
PDGFBP01127 AC097467.4-201ENST00000605504 141 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.16□□□□□ -1.42
PDGFBP01127 AC087565.3-203ENST00000641018 837 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.16□□□□□ -1.42
PDGFBP01127 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
PDGFBP01127 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.16□□□□□ -1.42
PDGFBP01127 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PDGFBP01127 AC024587.1-201ENST00000505925 2157 ntBASIC6.16□□□□□ -1.42
PDGFBP01127 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFBP01127 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFBP01127 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFBP01127 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFBP01127 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFBP01127 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFBP01127 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFBP01127 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFBP01127 AC110597.1-201ENST00000562669 3176 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 AC025470.1-201ENST00000510053 2032 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFBP01127 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFBP01127 AL161756.3-201ENST00000641216 2071 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFBP01127 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFBP01127 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFBP01127 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFBP01127 RNA5SP507-201ENST00000363603 121 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 RN7SKP128-201ENST00000364270 303 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 AL133270.1-201ENST00000402635 279 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFBP01127 RPL23AP27-201ENST00000415161 451 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFBP01127 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.15□□□□□ -1.42
PDGFBP01127 TNPO1P1-201ENST00000423641 1138 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFBP01127 VN1R96P-201ENST00000446052 858 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 AC073850.1-201ENST00000449243 255 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 RPL5P12-201ENST00000477071 851 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 AC117395.1-201ENST00000487390 403 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.15□□□□□ -1.42
PDGFBP01127 IGLV3-30-201ENST00000524362 298 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PDGFBP01127 HAUS8P1-201ENST00000549005 542 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFBP01127 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.15□□□□□ -1.42
PDGFBP01127 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDGFBP01127 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
PDGFBP01127 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.15□□□□□ -1.42
PDGFBP01127 MIR6820-201ENST00000611508 62 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 RN7SL544P-201ENST00000617232 284 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 RN7SL763P-201ENST00000620922 284 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.15□□□□□ -1.42
PDGFBP01127 AP000550.3-201ENST00000637734 379 ntBASIC6.15□□□□□ -1.42
PDGFBP01127 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFBP01127 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFBP01127 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFBP01127 PDZK1P1-202ENST00000425209 1350 ntBASIC6.15□□□□□ -1.43
PDGFBP01127 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.43
PDGFBP01127 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFBP01127 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFBP01127 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
PDGFBP01127 AL592429.1-201ENST00000403909 1473 ntBASIC6.15□□□□□ -1.43
PDGFBP01127 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PDGFBP01127 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFBP01127 AC116158.1-201ENST00000560231 2129 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms