Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.12□□□□□ -1.43
GPC4O75487 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.12□□□□□ -1.43
GPC4O75487 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GPC4O75487 AC010547.7-201ENST00000570323 333 ntBASIC6.12□□□□□ -1.43
GPC4O75487 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.12□□□□□ -1.43
GPC4O75487 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
GPC4O75487 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.12□□□□□ -1.43
GPC4O75487 uc_338.29-201ENST00000615099 168 ntBASIC6.12□□□□□ -1.43
GPC4O75487 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.12□□□□□ -1.43
GPC4O75487 AL353684.1-201ENST00000622677 1120 ntBASIC6.12□□□□□ -1.43
GPC4O75487 AP001541.1-201ENST00000623322 1904 ntBASIC6.12□□□□□ -1.43
GPC4O75487 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GPC4O75487 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.12□□□□□ -1.43
GPC4O75487 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GPC4O75487 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
GPC4O75487 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GPC4O75487 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GPC4O75487 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.11□□□□□ -1.43
GPC4O75487 HDAC1P2-201ENST00000453661 1398 ntBASIC6.11□□□□□ -1.43
GPC4O75487 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.11□□□□□ -1.43
GPC4O75487 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GPC4O75487 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
GPC4O75487 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
GPC4O75487 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
GPC4O75487 MIR188-201ENST00000385034 86 ntBASIC6.11□□□□□ -1.43
GPC4O75487 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.11□□□□□ -1.43
GPC4O75487 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.11□□□□□ -1.43
GPC4O75487 AC006455.6-201ENST00000426192 893 ntBASIC6.11□□□□□ -1.43
GPC4O75487 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.11□□□□□ -1.43
GPC4O75487 OR7E22P-201ENST00000478335 1035 ntBASIC6.11□□□□□ -1.43
GPC4O75487 AC135999.1-201ENST00000478962 479 ntBASIC6.11□□□□□ -1.43
GPC4O75487 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.11□□□□□ -1.43
GPC4O75487 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.11□□□□□ -1.43
GPC4O75487 SNX18P24-201ENST00000505249 671 ntBASIC6.11□□□□□ -1.43
GPC4O75487 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.11□□□□□ -1.43
GPC4O75487 OR6M2P-201ENST00000529831 871 ntBASIC6.11□□□□□ -1.43
GPC4O75487 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.11□□□□□ -1.43
GPC4O75487 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GPC4O75487 AC121758.1-202ENST00000556917 658 ntBASIC6.11□□□□□ -1.43
GPC4O75487 HMGN2P47-201ENST00000559378 272 ntBASIC6.11□□□□□ -1.43
GPC4O75487 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GPC4O75487 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.11□□□□□ -1.43
GPC4O75487 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.11□□□□□ -1.43
GPC4O75487 AC048341.3-201ENST00000619323 491 ntBASIC6.11□□□□□ -1.43
GPC4O75487 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.11□□□□□ -1.43
GPC4O75487 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GPC4O75487 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GPC4O75487 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
GPC4O75487 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.11□□□□□ -1.43
GPC4O75487 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
GPC4O75487 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.11□□□□□ -1.43
GPC4O75487 AC022164.1-201ENST00000568767 2673 ntBASIC6.11□□□□□ -1.43
GPC4O75487 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GPC4O75487 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GPC4O75487 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GPC4O75487 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.1□□□□□ -1.43
GPC4O75487 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
GPC4O75487 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
GPC4O75487 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.1□□□□□ -1.43
GPC4O75487 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
GPC4O75487 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GPC4O75487 SNORA43.1-201ENST00000364863 140 ntBASIC6.1□□□□□ -1.43
GPC4O75487 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.1□□□□□ -1.43
GPC4O75487 RNU6-891P-201ENST00000384280 111 ntBASIC6.1□□□□□ -1.43
GPC4O75487 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
GPC4O75487 RN7SKP108-201ENST00000411367 328 ntBASIC6.1□□□□□ -1.43
GPC4O75487 MRPS21P2-201ENST00000424704 264 ntBASIC6.1□□□□□ -1.43
GPC4O75487 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.1□□□□□ -1.43
GPC4O75487 AL645936.1-201ENST00000441979 518 ntBASIC6.1□□□□□ -1.43
GPC4O75487 GAPDHP23-201ENST00000444823 993 ntBASIC6.1□□□□□ -1.43
GPC4O75487 AL590004.3-202ENST00000445883 451 ntBASIC6.1□□□□□ -1.43
GPC4O75487 RAD1P2-201ENST00000446414 663 ntBASIC6.1□□□□□ -1.43
GPC4O75487 YRDCP3-201ENST00000456507 480 ntBASIC6.1□□□□□ -1.43
GPC4O75487 RPL34P33-201ENST00000486062 334 ntBASIC6.1□□□□□ -1.43
GPC4O75487 RPS27P20-201ENST00000492051 246 ntBASIC6.1□□□□□ -1.43
GPC4O75487 RN7SL362P-201ENST00000494228 267 ntBASIC6.1□□□□□ -1.43
GPC4O75487 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.1□□□□□ -1.43
GPC4O75487 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.1□□□□□ -1.43
GPC4O75487 AC026782.2-201ENST00000510845 636 ntBASIC6.1□□□□□ -1.43
GPC4O75487 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GPC4O75487 RNU6-1334P-201ENST00000516032 105 ntBASIC6.1□□□□□ -1.43
GPC4O75487 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.1□□□□□ -1.43
GPC4O75487 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GPC4O75487 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.1□□□□□ -1.43
GPC4O75487 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GPC4O75487 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms