Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SSX4O60224 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 AC093671.1-201ENST00000624981 2929 ntBASIC5.64□□□□□ -1.51
SSX4O60224 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
SSX4O60224 RNU1-55P-201ENST00000365510 158 ntBASIC5.64□□□□□ -1.51
SSX4O60224 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSX4O60224 AL121835.1-201ENST00000404250 354 ntBASIC5.64□□□□□ -1.51
SSX4O60224 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSX4O60224 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 VN1R31P-201ENST00000417498 730 ntBASIC5.64□□□□□ -1.51
SSX4O60224 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 VN1R20P-201ENST00000425215 966 ntBASIC5.64□□□□□ -1.51
SSX4O60224 AC115283.1-201ENST00000427353 400 ntBASIC5.64□□□□□ -1.51
SSX4O60224 AC239367.3-201ENST00000428996 814 ntBASIC5.64□□□□□ -1.51
SSX4O60224 KCTD9P1-201ENST00000430462 1167 ntBASIC5.64□□□□□ -1.51
SSX4O60224 NDUFA5P1-201ENST00000433858 341 ntBASIC5.64□□□□□ -1.51
SSX4O60224 AL392003.1-201ENST00000434394 243 ntBASIC5.64□□□□□ -1.51
SSX4O60224 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX4O60224 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX4O60224 H3F3AP5-201ENST00000475267 429 ntBASIC5.64□□□□□ -1.51
SSX4O60224 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 RN7SL284P-201ENST00000498823 275 ntBASIC5.64□□□□□ -1.51
SSX4O60224 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 AC138409.2-202ENST00000507274 458 ntBASIC5.64□□□□□ -1.51
SSX4O60224 HMGN1P16-201ENST00000508308 283 ntBASIC5.64□□□□□ -1.51
SSX4O60224 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 RNA5SP441-201ENST00000516809 88 ntBASIC5.64□□□□□ -1.51
SSX4O60224 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 AC135983.3-201ENST00000528049 1226 ntBASIC5.64□□□□□ -1.51
SSX4O60224 AC005363.1-201ENST00000530779 351 ntBASIC5.64□□□□□ -1.51
SSX4O60224 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.64□□□□□ -1.51
SSX4O60224 AC084121.1-201ENST00000533882 835 ntBASIC5.64□□□□□ -1.51
SSX4O60224 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 SYPL1P2-201ENST00000582878 727 ntBASIC5.64□□□□□ -1.51
SSX4O60224 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX4O60224 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX4O60224 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.64□□□□□ -1.51
SSX4O60224 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 AC020763.5-201ENST00000623298 430 ntBASIC5.64□□□□□ -1.51
SSX4O60224 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX4O60224 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SSX4O60224 AC016745.2-201ENST00000608834 3443 ntBASIC5.64□□□□□ -1.51
SSX4O60224 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SSX4O60224 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX4O60224 AC022417.1-201ENST00000624768 1303 ntBASIC5.64□□□□□ -1.51
SSX4O60224 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX4O60224 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX4O60224 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SSX4O60224 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SSX4O60224 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SSX4O60224 AP005435.3-201ENST00000531260 3198 ntBASIC5.64□□□□□ -1.51
SSX4O60224 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSX4O60224 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
SSX4O60224 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX4O60224 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 LINC01613-201ENST00000561476 2780 ntBASIC5.63□□□□□ -1.51
SSX4O60224 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX4O60224 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SSX4O60224 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX4O60224 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX4O60224 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX4O60224 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX4O60224 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SSX4O60224 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SSX4O60224 RNA5SP77-201ENST00000365394 120 ntBASIC5.63□□□□□ -1.51
SSX4O60224 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX4O60224 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SSX4O60224 OR7E156P-201ENST00000400303 464 ntBASIC5.63□□□□□ -1.51
SSX4O60224 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX4O60224 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX4O60224 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX4O60224 AL354868.1-201ENST00000417077 482 ntBASIC5.63□□□□□ -1.51
SSX4O60224 RPS7P12-201ENST00000422385 582 ntBASIC5.63□□□□□ -1.51
SSX4O60224 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX4O60224 PSMD10P2-201ENST00000432890 672 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms