Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC069304.1-201ENST00000491593 704 ntBASIC7.51□□□□□ -1.21
SOX1O00570 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX1O00570 ST13P12-201ENST00000508958 1094 ntBASIC7.51□□□□□ -1.21
SOX1O00570 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX1O00570 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 AP005639.1-201ENST00000526939 192 ntBASIC7.51□□□□□ -1.21
SOX1O00570 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX1O00570 AC007068.2-201ENST00000543168 395 ntBASIC7.51□□□□□ -1.21
SOX1O00570 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX1O00570 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC7.51□□□□□ -1.21
SOX1O00570 AC093524.1-201ENST00000564266 1094 ntBASIC7.51□□□□□ -1.21
SOX1O00570 AL512347.1-201ENST00000566420 503 ntBASIC7.51□□□□□ -1.21
SOX1O00570 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.51□□□□□ -1.21
SOX1O00570 RN7SL622P-201ENST00000585292 275 ntBASIC7.51□□□□□ -1.21
SOX1O00570 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.51□□□□□ -1.21
SOX1O00570 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX1O00570 AC079089.3-201ENST00000603094 673 ntBASIC7.51□□□□□ -1.21
SOX1O00570 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.51□□□□□ -1.21
SOX1O00570 RBM12B-AS1-201ENST00000623283 653 ntBASIC7.51□□□□□ -1.21
SOX1O00570 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX1O00570 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SOX1O00570 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 AL359715.4-201ENST00000606629 1436 ntBASIC7.51□□□□□ -1.21
SOX1O00570 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX1O00570 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX1O00570 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX1O00570 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.51□□□□□ -1.21
SOX1O00570 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 ZNF849P-201ENST00000594711 1566 ntBASIC7.5□□□□□ -1.21
SOX1O00570 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.5□□□□□ -1.21
SOX1O00570 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 AC027279.4-201ENST00000624371 2072 ntBASIC7.5□□□□□ -1.21
SOX1O00570 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.5□□□□□ -1.21
SOX1O00570 CDY19P-201ENST00000411668 1613 ntBASIC7.5□□□□□ -1.21
SOX1O00570 CDY18P-201ENST00000438294 1609 ntBASIC7.5□□□□□ -1.21
SOX1O00570 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SOX1O00570 AL031123.2-201ENST00000563225 3325 ntBASIC7.5□□□□□ -1.21
SOX1O00570 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SOX1O00570 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 MIR323A-201ENST00000362199 86 ntBASIC7.5□□□□□ -1.21
SOX1O00570 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC7.5□□□□□ -1.21
SOX1O00570 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.5□□□□□ -1.21
SOX1O00570 OR2B8P-201ENST00000432841 938 ntBASIC7.5□□□□□ -1.21
SOX1O00570 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 GTF2IP7-202ENST00000436677 309 ntBASIC7.5□□□□□ -1.21
SOX1O00570 TUBB4BP6-201ENST00000437576 479 ntBASIC7.5□□□□□ -1.21
SOX1O00570 AC092641.1-201ENST00000440229 772 ntBASIC7.5□□□□□ -1.21
SOX1O00570 HMGB1P7-201ENST00000450921 612 ntBASIC7.5□□□□□ -1.21
SOX1O00570 AC233982.1-201ENST00000451247 436 ntBASIC7.5□□□□□ -1.21
SOX1O00570 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.5□□□□□ -1.21
SOX1O00570 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC7.5□□□□□ -1.21
SOX1O00570 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.5□□□□□ -1.21
SOX1O00570 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.5□□□□□ -1.21
SOX1O00570 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 AC092851.1-201ENST00000535964 478 ntBASIC7.5□□□□□ -1.21
SOX1O00570 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.5□□□□□ -1.21
SOX1O00570 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.5□□□□□ -1.21
SOX1O00570 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 MIR4489-201ENST00000578869 62 ntBASIC7.5□□□□□ -1.21
SOX1O00570 MIR3611-201ENST00000584484 83 ntBASIC7.5□□□□□ -1.21
SOX1O00570 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.5□□□□□ -1.21
SOX1O00570 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.5□□□□□ -1.21
SOX1O00570 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 AL589863.1-201ENST00000595383 631 ntBASIC7.5□□□□□ -1.21
SOX1O00570 AF131215.7-201ENST00000602443 707 ntBASIC7.5□□□□□ -1.21
SOX1O00570 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.5□□□□□ -1.21
SOX1O00570 AL356986.1-201ENST00000604085 341 ntBASIC7.5□□□□□ -1.21
SOX1O00570 AC021749.1-201ENST00000604322 607 ntBASIC7.5□□□□□ -1.21
SOX1O00570 SDR42E1P1-201ENST00000611327 477 ntBASIC7.5□□□□□ -1.21
SOX1O00570 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SOX1O00570 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.5□□□□□ -1.21
SOX1O00570 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 SAMMSON-214ENST00000641395 1264 ntBASIC7.5□□□□□ -1.21
SOX1O00570 LYARP1-201ENST00000436977 1501 ntBASIC7.5□□□□□ -1.21
SOX1O00570 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SOX1O00570 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 MAPK10-329ENST00000641555 2656 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms