Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 SNORA57.1-201ENST00000391227 145 ntBASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 AC078878.1-201ENST00000539832 958 ntBASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 AL590392.1-201ENST00000604960 446 ntBASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 AC112694.2-201ENST00000623697 768 ntBASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 OR52H1-202ENST00000641796 1061 ntBASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC9.12□□□□□ -0.95
RIMBP3Q9UFD9 MAPK10-377ENST00000642006 2752 ntBASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 AC009237.3-203ENST00000442128 3551 ntBASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 AL359091.1-201ENST00000449048 1734 ntBASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 RNA5SP515-201ENST00000364570 118 ntBASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 DUTP4-201ENST00000424782 475 ntBASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 AC092824.1-201ENST00000483524 576 ntBASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 OR11I1P-201ENST00000486033 954 ntBASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 AC109583.2-201ENST00000617367 129 ntBASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RIMBP3Q9UFD9 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 RNU1-149P-201ENST00000390870 161 ntBASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 snoU13.22-201ENST00000459428 104 ntBASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 AC068790.7-201ENST00000602347 528 ntBASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 AL031320.1-201ENST00000604177 357 ntBASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 MIR6780A-201ENST00000615089 68 ntBASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 AC132825.1-201ENST00000463573 2247 ntBASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
RIMBP3Q9UFD9 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 RN7SKP95-201ENST00000362860 303 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 MIR134-201ENST00000385258 73 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 RN7SKP126-201ENST00000411143 300 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 AC211486.3-201ENST00000412694 621 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 RN7SL570P-201ENST00000484405 292 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 AC078899.1-201ENST00000521432 1185 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms