Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.12□□□□□ -1.43
SPASTQ9UBP0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.12□□□□□ -1.43
SPASTQ9UBP0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.12□□□□□ -1.43
SPASTQ9UBP0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.12□□□□□ -1.43
SPASTQ9UBP0 AC011369.2-201ENST00000624423 1567 ntBASIC6.12□□□□□ -1.43
SPASTQ9UBP0 CASC19-255ENST00000641733 1385 ntBASIC6.12□□□□□ -1.43
SPASTQ9UBP0 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.12□□□□□ -1.43
SPASTQ9UBP0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SPASTQ9UBP0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.12□□□□□ -1.43
SPASTQ9UBP0 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.12□□□□□ -1.43
SPASTQ9UBP0 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC018628.1-201ENST00000624147 3819 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AL133243.2-201ENST00000610331 1621 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 SUGT1P2-201ENST00000379452 992 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 RNU6-167P-201ENST00000384292 106 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AL451046.1-201ENST00000406097 534 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 U3.43-201ENST00000410734 213 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AL590399.4-201ENST00000436561 601 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AL359839.1-201ENST00000451975 1160 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 OR2A3P-201ENST00000493774 953 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 CR383658.1-201ENST00000514609 734 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 RN7SKP238-201ENST00000516483 249 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC060775.1-201ENST00000518241 520 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AP001858.2-201ENST00000536213 601 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 LINC00556-201ENST00000569603 412 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC023389.2-201ENST00000580031 955 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC233702.7-202ENST00000582941 211 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC241377.1-201ENST00000619797 406 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 FO681491.1-202ENST00000623392 737 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 SNX18P12-201ENST00000624821 759 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 IMMTP1-201ENST00000435590 2219 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 AC024651.2-201ENST00000562480 2098 ntBASIC6.11□□□□□ -1.43
SPASTQ9UBP0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SPASTQ9UBP0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 AC123912.3-201ENST00000600907 1367 ntBASIC6.1□□□□□ -1.43
SPASTQ9UBP0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 RNA5SP514-201ENST00000363717 111 ntBASIC6.1□□□□□ -1.43
SPASTQ9UBP0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 RPS3P2-201ENST00000421346 701 ntBASIC6.1□□□□□ -1.43
SPASTQ9UBP0 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 CFL1P4-201ENST00000451536 498 ntBASIC6.1□□□□□ -1.43
SPASTQ9UBP0 RANP2-201ENST00000456833 229 ntBASIC6.1□□□□□ -1.43
SPASTQ9UBP0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 Y_RNA.710-201ENST00000516975 110 ntBASIC6.1□□□□□ -1.43
SPASTQ9UBP0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.1□□□□□ -1.43
SPASTQ9UBP0 RPA2P1-201ENST00000556557 721 ntBASIC6.1□□□□□ -1.43
SPASTQ9UBP0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms