Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC097359.1-201ENST00000447946 463 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AKR1D1P1-201ENST00000457236 936 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 OR7E22P-201ENST00000478335 1035 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 RN7SL776P-201ENST00000493390 268 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC098976.1-201ENST00000513014 541 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 RNA5SP418-201ENST00000515951 117 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 IGHVII-51-2-201ENST00000519778 259 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC137627.1-201ENST00000545761 289 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC008055.1-201ENST00000547032 609 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 DCN-215ENST00000550099 719 ntTSL 2 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 NMNAT1P5-201ENST00000559657 841 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AP001542.1-201ENST00000591314 200 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC022106.1-201ENST00000612834 766 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC096861.1-201ENST00000616652 240 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC026367.3-201ENST00000619032 590 ntBASIC6□□□□□ -1.45
VIPAS39Q9H9C1 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6□□□□□ -1.45
VIPAS39Q9H9C1 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 AC099654.3-201ENST00000447087 1546 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 RNA5SP346-201ENST00000363541 121 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 MIR188-201ENST00000385034 86 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 AL139100.1-201ENST00000408001 498 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 VN1R53P-201ENST00000429536 957 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 CHCHD4P5-201ENST00000436684 427 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 RPL12P18-201ENST00000437175 325 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 NPM1P19-201ENST00000450070 712 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 HIGD1AP16-201ENST00000450986 258 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 AC018475.1-201ENST00000478358 465 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 RPL7L1P7-201ENST00000509986 724 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 RPS4XP21-201ENST00000603814 750 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 AL035661.1-201ENST00000620459 1144 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 AP003072.5-201ENST00000623872 773 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 AL137141.1-201ENST00000624622 4836 ntBASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VIPAS39Q9H9C1 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 ABCC13-202ENST00000463099 3842 ntBASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 RPSAP44-201ENST00000406712 884 ntBASIC5.98□□□□□ -1.45
VIPAS39Q9H9C1 MIR1231-201ENST00000408101 92 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms