Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RTFDC1Q9BY42 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RTFDC1Q9BY42 GUCY1B2-204ENST00000531898 1979 ntBASIC7.51□□□□□ -1.21
RTFDC1Q9BY42 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RTFDC1Q9BY42 NCOA4P3-201ENST00000513203 1877 ntBASIC7.51□□□□□ -1.21
RTFDC1Q9BY42 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RTFDC1Q9BY42 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.51□□□□□ -1.21
RTFDC1Q9BY42 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.51□□□□□ -1.21
RTFDC1Q9BY42 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RTFDC1Q9BY42 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RTFDC1Q9BY42 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 GNL2P1-201ENST00000451274 2190 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 CR382285.2-201ENST00000624662 1495 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 FO082842.1-201ENST00000423552 1370 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AC087565.3-202ENST00000642085 1603 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AL445238.1-204ENST00000400311 463 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 RPS7P8-201ENST00000418311 581 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 RPL34P27-201ENST00000428810 349 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 MTND4LP14-201ENST00000429447 288 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 TUBB4BP6-201ENST00000437576 479 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 YWHAEP1-201ENST00000453697 763 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 SNX18P26-201ENST00000458433 740 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 PCNAP4-201ENST00000532690 730 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AC027281.1-201ENST00000574178 758 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 ADAD1P2-201ENST00000588476 646 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AC097467.4-201ENST00000605504 141 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AC096861.1-201ENST00000616652 240 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 MIR6719-201ENST00000622428 87 ntBASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.5□□□□□ -1.21
RTFDC1Q9BY42 AL133243.4-201ENST00000623116 3109 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 WDR95P-201ENST00000425638 1542 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 MIR375-201ENST00000362103 64 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 RNA5SP350-201ENST00000363298 111 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 RNU1-24P-201ENST00000364285 165 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 RN7SKP161-201ENST00000411110 305 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 AL096829.1-201ENST00000413677 457 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 RPS15AP29-201ENST00000445539 400 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 RPSAP37-201ENST00000470913 821 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 MIR5095-201ENST00000578844 88 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 AC018690.1-201ENST00000608144 626 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 AC069234.4-201ENST00000621276 412 ntBASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RTFDC1Q9BY42 AC013488.1-201ENST00000526618 1838 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms