Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.31□□□□□ -1.24
RPAP1Q9BWH6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 AC024587.1-201ENST00000505925 2157 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 TMSB4XP2-201ENST00000335179 210 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 U3.25-201ENST00000391209 220 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 AL354890.1-201ENST00000413730 346 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 PTCD2P2-201ENST00000415579 1095 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 AC245884.2-201ENST00000426257 404 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 BRWD1P3-201ENST00000428816 390 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 AL512637.1-201ENST00000439523 1231 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 AL451063.1-201ENST00000450164 1133 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 AC023141.9-201ENST00000458734 412 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 AL049840.6-202ENST00000603373 279 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 AL645933.2-201ENST00000606743 1207 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 AC092724.1-201ENST00000624623 3397 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 RNF19BPY-201ENST00000458209 1550 ntBASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RPAP1Q9BWH6 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 AC114876.1-201ENST00000490962 1366 ntBASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 AL445466.1-201ENST00000448432 357 ntBASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 AP006222.1-205ENST00000450734 457 ntBASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 AL445665.1-202ENST00000452436 324 ntBASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 RN7SL717P-201ENST00000478343 297 ntBASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 AL357562.1-201ENST00000624911 609 ntBASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 CCAT2-201ENST00000630920 1752 ntBASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RPAP1Q9BWH6 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 RNA5SP242-201ENST00000364171 118 ntBASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 RPL23AP17-201ENST00000401064 499 ntBASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 RPS3AP2-201ENST00000407190 754 ntBASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 AL096829.1-201ENST00000413677 457 ntBASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 ZNF619P1-201ENST00000446539 752 ntBASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 AC074386.1-201ENST00000476560 767 ntBASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 AC119403.2-201ENST00000590960 598 ntBASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 MIR132-201ENST00000591554 101 ntBASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms