Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AP003175.1-201ENST00000641383 6658 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 RNU4-68P-201ENST00000364314 141 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 RNU6-636P-201ENST00000384598 107 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL355379.1-201ENST00000405542 640 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 RN7SKP229-201ENST00000410465 302 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 RN7SKP206-201ENST00000410823 293 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 RPSAP32-201ENST00000432681 526 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 TRIM60P9Y-201ENST00000438459 816 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 HMGN1P6-201ENST00000438508 291 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 HMGN1P2-201ENST00000445197 310 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 TRIM60P11Y-201ENST00000445313 801 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC104339.1-201ENST00000465478 348 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 RPF2P2-201ENST00000504693 896 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 MRPS33P3-201ENST00000513456 322 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 SEC11B-201ENST00000518383 499 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 NOP56P3-201ENST00000549457 385 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 MIR3154-201ENST00000577829 84 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC092106.3-201ENST00000611308 722 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC109309.2-201ENST00000612597 332 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 AC006338.2-201ENST00000616864 791 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.78□□□□□ -1.16
SYNGAP1Q96PV0 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
SYNGAP1Q96PV0 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.16
SYNGAP1Q96PV0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
SYNGAP1Q96PV0 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.77□□□□□ -1.16
SYNGAP1Q96PV0 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.77□□□□□ -1.16
SYNGAP1Q96PV0 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 NCOA4P3-201ENST00000513203 1877 ntBASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 AC011815.2-201ENST00000618230 2021 ntBASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 MAPK10-357ENST00000641831 2858 ntBASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 AC087565.3-202ENST00000642085 1603 ntBASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 AC104454.1-201ENST00000421341 1401 ntBASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 RN7SKP86-201ENST00000410454 332 ntBASIC7.77□□□□□ -1.17
SYNGAP1Q96PV0 AC096537.2-201ENST00000413707 714 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms