Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 OR4D12P-201ENST00000509361 911 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 SNORA74.1-201ENST00000516320 180 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 OR4H6P-201ENST00000563771 921 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 BNIP3P39-201ENST00000601077 554 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AC084036.1-201ENST00000609190 508 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 MIR6823-201ENST00000622118 61 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AC116667.2-201ENST00000641075 823 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 MAPK10-350ENST00000641777 965 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AC027279.1-201ENST00000568885 4284 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 ZNF402P-201ENST00000404435 3100 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AC027279.4-201ENST00000624371 2072 ntBASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CDK5RAP3Q96JB5 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AP001002.1-201ENST00000625148 1513 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 OR11H13P-201ENST00000359695 979 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 RNU6-1176P-201ENST00000390955 107 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 RN7SKP121-201ENST00000410842 305 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 HSFY7P-201ENST00000432672 318 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 MRPS33P4-201ENST00000434892 317 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 HSFY8P-201ENST00000437934 318 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 SCAND3P1-201ENST00000439854 1060 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC016908.1-201ENST00000442571 1219 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 MTND2P25-201ENST00000449028 610 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 MTND5P8-201ENST00000449817 1083 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 HSFY5P-201ENST00000453726 309 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 RPL12P31-201ENST00000478433 450 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC044810.1-201ENST00000480271 711 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC106806.2-201ENST00000509365 500 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC025768.1-201ENST00000510057 267 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 KHDC1P1-201ENST00000511053 508 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 RNA5SP206-201ENST00000516703 121 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 BTG1P1-201ENST00000540396 508 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AL021368.3-201ENST00000607119 578 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC084824.5-201ENST00000612009 413 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC015819.1-201ENST00000613588 663 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AC012676.3-201ENST00000614983 479 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 HTR1DP1-201ENST00000616500 888 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 LINC01613-201ENST00000561476 2780 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 AP001541.1-201ENST00000623322 1904 ntBASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.03□□□□□ -1.28
CDK5RAP3Q96JB5 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CDK5RAP3Q96JB5 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms