Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 RNA5SP478-201ENST00000364657 115 ntBASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 U3.36-201ENST00000408418 213 ntBASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 MGAT2P1-201ENST00000449718 797 ntBASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 RPL7P45-201ENST00000455851 743 ntBASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 AC083809.1-201ENST00000615051 472 ntBASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 AC109583.2-201ENST00000617367 129 ntBASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 RPS3AP41-201ENST00000462701 778 ntBASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 RPL37AP8-201ENST00000494116 276 ntBASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 USP3-201ENST00000268049 5311 ntTSL 5 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 OR7E158P-201ENST00000524483 910 ntBASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 CCAT2-201ENST00000630920 1752 ntBASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AP000641.1-201ENST00000531988 1639 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 MIR141-201ENST00000384975 95 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AC079753.1-201ENST00000623243 3868 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AC019185.1-201ENST00000442718 389 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AL355974.3-201ENST00000617383 467 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 PARP4P2-201ENST00000446672 3326 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AP003972.1-201ENST00000625192 5446 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 IGKV1OR22-5-201ENST00000458718 354 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 RN7SL459P-201ENST00000481078 302 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 BTF3P13-201ENST00000513224 490 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 BRD9P1-201ENST00000529855 560 ntBASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ALMS1Q8TCU4 RNU1-24P-201ENST00000364285 165 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms