Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 RN7SKP113-201ENST00000363891 295 ntBASIC5.79□□□□□ -1.48
RIF1Q5UIP0 SNORA11C-201ENST00000408532 129 ntBASIC5.79□□□□□ -1.48
RIF1Q5UIP0 AL049745.1-201ENST00000433953 286 ntBASIC5.79□□□□□ -1.48
RIF1Q5UIP0 AC073072.2-201ENST00000447425 348 ntBASIC5.79□□□□□ -1.48
RIF1Q5UIP0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 HPRT1P1-201ENST00000509498 657 ntBASIC5.79□□□□□ -1.48
RIF1Q5UIP0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 MRPS5P4-201ENST00000592830 325 ntBASIC5.79□□□□□ -1.48
RIF1Q5UIP0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 CD86-209ENST00000493101 1572 ntTSL 2 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 IQCB2P-201ENST00000401788 1633 ntBASIC5.79□□□□□ -1.48
RIF1Q5UIP0 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 LDHBP2-201ENST00000456969 1005 ntBASIC5.79□□□□□ -1.48
RIF1Q5UIP0 RN7SL481P-201ENST00000477764 299 ntBASIC5.79□□□□□ -1.48
RIF1Q5UIP0 AC091965.3-201ENST00000506236 208 ntBASIC5.79□□□□□ -1.48
RIF1Q5UIP0 HMGB1P42-201ENST00000532126 553 ntBASIC5.79□□□□□ -1.48
RIF1Q5UIP0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 MIR8080-201ENST00000622224 89 ntBASIC5.79□□□□□ -1.48
RIF1Q5UIP0 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 FO082842.1-201ENST00000423552 1370 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 EPS15P1-202ENST00000459691 2071 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 AC024651.2-201ENST00000562480 2098 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 AC010478.1-201ENST00000601500 6762 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 AC239367.2-201ENST00000447309 705 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 RPL5P22-201ENST00000480199 884 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 IGBP1P5-201ENST00000507524 1000 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 AC093824.1-201ENST00000508796 343 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 AC010343.2-201ENST00000510162 224 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 ARHGAP42P5-201ENST00000548856 2936 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 AC018558.5-201ENST00000565840 952 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 AC015720.2-201ENST00000567709 334 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 AL109618.2-201ENST00000605527 211 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
RIF1Q5UIP0 SAMM50P1-201ENST00000455403 1399 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 AC010624.4-201ENST00000597606 1351 ntBASIC5.78□□□□□ -1.48
RIF1Q5UIP0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
RIF1Q5UIP0 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.77□□□□□ -1.48
RIF1Q5UIP0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.77□□□□□ -1.48
RIF1Q5UIP0 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.77□□□□□ -1.48
RIF1Q5UIP0 AC093166.4-201ENST00000457867 318 ntBASIC5.77□□□□□ -1.48
RIF1Q5UIP0 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.77□□□□□ -1.48
RIF1Q5UIP0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.77□□□□□ -1.48
RIF1Q5UIP0 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.77□□□□□ -1.48
RIF1Q5UIP0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.77□□□□□ -1.48
RIF1Q5UIP0 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.77□□□□□ -1.48
RIF1Q5UIP0 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.77□□□□□ -1.48
RIF1Q5UIP0 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.77□□□□□ -1.49
RIF1Q5UIP0 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.77□□□□□ -1.49
RIF1Q5UIP0 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms