Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 MROH3P-201ENST00000435735 2676 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 OLMALINC-203ENST00000641087 3779 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 AL050335.1-201ENST00000396909 869 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 CDK7P1-201ENST00000434574 693 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 PDCL3P4-201ENST00000489621 720 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 AC009120.1-201ENST00000493458 473 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 AC091965.3-201ENST00000506236 208 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 AC134698.5-201ENST00000519444 336 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 OR6M2P-201ENST00000529831 871 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.17□□□□□ -1.58
LRRK2Q5S007 PPATP2-201ENST00000605635 508 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 WBP1LP8-201ENST00000617401 327 ntBASIC5.17□□□□□ -1.58
LRRK2Q5S007 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRRK2Q5S007 AP004289.1-201ENST00000436307 2205 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 AC026464.2-201ENST00000567834 2421 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 AC083982.1-201ENST00000485679 344 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 OFD1P10Y-201ENST00000434110 1433 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 AC114786.1-201ENST00000512892 1415 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 MAPK10-287ENST00000641217 3037 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 AC013442.1-201ENST00000397347 228 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 RPS4XP5-201ENST00000419038 768 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 MORF4L1P5-201ENST00000433352 961 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 RPS29P33-201ENST00000456717 146 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 MRPS16P1-201ENST00000523462 412 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 NMNAT1P5-201ENST00000559657 841 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.16□□□□□ -1.58
LRRK2Q5S007 AL445528.2-201ENST00000620582 470 ntBASIC5.16□□□□□ -1.58
LRRK2Q5S007 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRRK2Q5S007 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LRRK2Q5S007 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRK2Q5S007 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRK2Q5S007 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRK2Q5S007 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRK2Q5S007 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.15□□□□□ -1.58
LRRK2Q5S007 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRRK2Q5S007 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LRRK2Q5S007 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LRRK2Q5S007 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms