Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3F3AP84243 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3F3AP84243 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3F3AP84243 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.38□□□□□ -1.55
H3F3AP84243 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.38□□□□□ -1.55
H3F3AP84243 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.38□□□□□ -1.55
H3F3AP84243 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.38□□□□□ -1.55
H3F3AP84243 AC123769.1-201ENST00000530992 3192 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
H3F3AP84243 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H3F3AP84243 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3F3AP84243 COX6B1P3-201ENST00000312310 260 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.38□□□□□ -1.55
H3F3AP84243 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.38□□□□□ -1.55
H3F3AP84243 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H3F3AP84243 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H3F3AP84243 AL096711.1-201ENST00000404780 554 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 RNU2-18P-201ENST00000411224 162 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.38□□□□□ -1.55
H3F3AP84243 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.38□□□□□ -1.55
H3F3AP84243 GAPDHP75-201ENST00000433910 943 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.38□□□□□ -1.55
H3F3AP84243 SDC4P-201ENST00000453285 601 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 PPIAP27-201ENST00000453800 265 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 Z83838.1-202ENST00000456225 839 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 SLC25A51P1-201ENST00000468432 871 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 RN7SL170P-201ENST00000487098 295 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 AL158068.1-201ENST00000506116 616 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 LDHAP1-201ENST00000509421 992 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 AC011853.1-201ENST00000518911 454 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.38□□□□□ -1.55
H3F3AP84243 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.38□□□□□ -1.55
H3F3AP84243 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.38□□□□□ -1.55
H3F3AP84243 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.38□□□□□ -1.55
H3F3AP84243 AP000619.2-201ENST00000546014 969 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 RPA2P1-201ENST00000556557 721 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.38□□□□□ -1.55
H3F3AP84243 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.38□□□□□ -1.55
H3F3AP84243 AC008507.3-201ENST00000585753 472 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 AC090236.2-201ENST00000587933 1101 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.38□□□□□ -1.55
H3F3AP84243 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.38□□□□□ -1.55
H3F3AP84243 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
H3F3AP84243 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.38□□□□□ -1.55
H3F3AP84243 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
H3F3AP84243 AC073592.6-201ENST00000624271 415 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.38□□□□□ -1.55
H3F3AP84243 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
H3F3AP84243 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3F3AP84243 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
H3F3AP84243 AC093225.1-201ENST00000506867 1408 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3F3AP84243 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.38□□□□□ -1.55
H3F3AP84243 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3F3AP84243 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3F3AP84243 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
H3F3AP84243 QRSL1P1-201ENST00000400977 1540 ntBASIC5.38□□□□□ -1.55
H3F3AP84243 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3F3AP84243 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
H3F3AP84243 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.37□□□□□ -1.55
H3F3AP84243 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.37□□□□□ -1.55
H3F3AP84243 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.37□□□□□ -1.55
H3F3AP84243 NLRP3P1-201ENST00000622303 1785 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
H3F3AP84243 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
H3F3AP84243 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.37□□□□□ -1.55
H3F3AP84243 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
H3F3AP84243 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.37□□□□□ -1.55
H3F3AP84243 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
H3F3AP84243 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 OR10R3P-201ENST00000361688 942 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 RN7SKP186-201ENST00000365371 303 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 RPL23AP17-201ENST00000401064 499 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.37□□□□□ -1.55
H3F3AP84243 RPL24P2-201ENST00000421023 475 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 NMD3P2-201ENST00000421815 761 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
H3F3AP84243 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
H3F3AP84243 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.37□□□□□ -1.55
H3F3AP84243 AC005077.1-201ENST00000449226 375 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.37□□□□□ -1.55
H3F3AP84243 AC023194.2-201ENST00000465398 406 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 RN7SL269P-201ENST00000467795 305 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 AC023245.1-201ENST00000468501 517 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 SNRPCP3-201ENST00000474888 476 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 RPL37P23-201ENST00000492641 294 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.37□□□□□ -1.55
H3F3AP84243 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.37□□□□□ -1.55
H3F3AP84243 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.37□□□□□ -1.55
H3F3AP84243 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.37□□□□□ -1.55
H3F3AP84243 AC244502.2-201ENST00000543361 851 ntBASIC5.37□□□□□ -1.55
H3F3AP84243 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.37□□□□□ -1.55
H3F3AP84243 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.37□□□□□ -1.55
H3F3AP84243 AC005244.1-201ENST00000582566 339 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms